Oncorhynchus tshawytscha (Chinook salmon): 112220034
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Entry
112220034 CDS
T05605
Symbol
dennd1a
Name
(RefSeq) DENN domain-containing protein 1A isoform X2
KO
K20160
DENN domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220034 (dennd1a)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112220034 (dennd1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
Motif
Other DBs
NCBI-GeneID:
112220034
NCBI-ProteinID:
XP_024237357
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All DBs
Position
LG20:complement(38625033..38783656)
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AA seq
1021 aa
AA seq
DB search
MGSRIKDNPEATFEVYLEVTHPGTTGSDPEVRRRFPEDYIDQETLQTVPKFCFPFSVDSL
SVSQVGQNFTFVLTDIESKQRFGFCRLSSGAHSCYCILSYLPWFEVFYKLLNILADYTIK
GQESQWRELLESLHTLPIPDPGVPVHLSVHSYFTVPDTRELPSIPENRNLTEYFVAVDVN
NMLHLYASMLYERRILICCSKLSTLTACVHGSAAMMYPMYWQHVYIPVLPQHLIDYCCAP
MPYLIGVHSSLMEKVRGMALDDVVVLNVDTNTLETPFDDLQSLPNDVVSSLKNRLKKVST
TTGDGVARAFLKTQAALFGCYRNALQIQPGEPITFSEEVFVTHRSSAMRQFLQNAIQLQL
FKQFIDGRLDLLNAGEGFSDVFEDEINMGEYAGSDKNYHQWLFTVKKGGGAIFNTVRTKA
NPAMKTVYKFAKDHARMGIKEVKSRLKQKELAENGYSSTVGTGGTGTGTGEEGTTAGSPT
STDGKDGSARTWDERRPITVHFGQARPPRPQVAKRPRSNVGLESSPEHGGRPTRHYTVFL
SEDSSGDELQHEDHSIASFPENFLFSAPFEWSPLPPPYRSLKEAEEGEEPISGPSYTAPP
SPVMEKFADINLLGNMFSCLDEPEGQQLSLAKSLEDLRTPKDPQEQQKLIYQRMDLSGTL
PGLKHSNPYNKMWSMHGQDDMAMSGRVSPNWDRPLSVPPPDLEELRPPSRESFGPGVLER
PDLFTTPSQGECITIPRPQGRKTPEPGKVLGPPPVPQPRIKPGVVGDGGTTTAGGQEFRQ
ALGMGGDLMLQPTKMDFNDAEDVDLLSLLDPLNNPAQTTTTPALAGEGADSRSCAEPPTS
RPVLPPRPYPQSLPPFHQHMPLNPFTPPLGYSTHRHYSPTVAGNPFGGRAYGPPASTYFH
ASPHGHPPHPLSTMLGLYRLSSPVGSTLPPGMGSMRSAFPNHGGPPPTSSGSHHALSNLL
DSPSVPTPSLATRVLPKPPNTAEDSNETQDPFGDLLAMAKPAAAPPKKKVEGLRGKWETF
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggggtcccgtatcaaggacaaccctgaggccactttcgaggtgtacctggaggtgacc
catcctggaaccactggctctgatccggaggtgcggaggcgattccccgaggactacatc
gaccaggaaactcttcagacagtccccaagttctgcttccccttcagtgtggacagtctg
tcggtgagccaagtgggccagaacttcacctttgttctgacggacatcgagagcaagcag
cgctttggcttctgccgcctctcctcgggggcccacagctgctactgcatcctcagctat
ctgccctggtttgaggtattctacaagctgctcaatatcctcgctgactacacaatcaaa
ggccaggagagtcagtggcgagagctcctggagtcactccatacactccccatccctgat
cctggagtaccagtccatcttagcgtgcattcctactttactgtgcctgacacaagggaa
ttacccagcatacctgaaaacagaaacctaacagagtattttgtagccgtagatgtcaat
aacatgctccatctgtacgctagtatgctttatgagcgtcgaatcctcatctgctgtagc
aaactaagcaccttaacggcttgtgttcacgggtcggcggccatgatgtacccaatgtat
tggcaacacgtttacattcctgtcctgcctcagcacctcatagactactgctgtgcgccc
atgccctacctcattggagtacattccagcctaatggagaaggtgagggggatggccctg
gatgacgtagtagtcctcaacgtagacaccaacaccctagaaacaccctttgatgacctc
caaagcctgcccaacgatgtggtgtcatccttaaagaatcgcctgaagaaggtttccacc
acgacgggagatggcgtggcccgagctttcctcaagacacaggccgctctcttcggctgc
tacaggaacgcgctgcagatccaaccgggagagccaataacgttcagtgaggaggtcttt
gtgacccaccgctccagtgccatgagacagttcctgcagaacgccatccagctgcagctc
ttcaaacagttcatcgatggccgcttggacctgctgaacgctggtgagggcttcagtgat
gttttcgaggatgagatcaacatgggagagtatgcaggcagcgacaaaaactaccaccag
tggctattcacagtaaagaaagggggcggtgctatctttaacacagtgaggaccaaggct
aatccggccatgaaaacagtctataagtttgctaaagatcatgccaggatggggataaag
gaagtcaagagccgactaaagcaaaaggagctggcagagaatggctactcctcgacagtg
ggcactggtggcacaggaacgggcaccggggaggagggcaccactgccgggtcgcccacc
tccacagacggaaaggacggcagcgcccgcacctgggacgaacggcgtcctatcactgtg
cactttggacaggcccgtccacctaggcctcaggtggccaagagacctcgcagcaacgtg
ggcctggagagtagccctgaacatggtggccgtcccacacgtcactacacagtatttctg
tccgaggactcatcaggcgacgagctgcagcacgaagaccactccattgccagcttcccc
gagaactttctcttctctgcccccttcgaatggtcacccctgccgcctccttaccgctcc
ctgaaagaggcagaggagggggaggagcccatcagcggcccctcctacacagccccgccc
agcccagtgatggagaagtttgctgatatcaacctgctggggaacatgttcagctgcttg
gacgagcctgagggacagcaactcagcctggccaagagcctggaggacctccgcacaccc
aaagacccccaggagcagcagaaattaatctaccagcggatggacctgagtggcaccctt
ccaggcctcaagcactccaacccctacaacaagatgtggagcatgcatgggcaggatgat
atggccatgtccggccgggtgtctccgaattgggaccgacccctgtccgtgcccccccct
gacctggaagagctgcggccccctagccgagagagcttcggtcccggggtcctcgagcgg
ccggatctcttcaccacccccagccaaggggagtgcatcaccatcccccgcccccagggg
aggaaaaccccagagccaggtaaggtcttgggtccgccaccagtgccccagccccggatc
aagccgggggtagtgggggatggtgggaccactacagcaggggggcaggagttccggcag
gcccttgggatggggggtgacctgatgctgcagcccaccaagatggacttcaatgacgcg
gaggatgtggacctgctcagcctcctggaccccctgaacaacccggcccagaccaccacc
accccagccttggcaggggaaggagcagactcacggtcctgtgccgaacctccaacctcc
aggcctgttctcccgccacgtccctaccctcagagcctgccccccttccaccaacacatg
cccctgaaccccttcaccccgcccctcggctactccacccacagacactactcgcccacc
gtagcggggaatcccttcggcggccgtgcctacgggcctcccgcctccacctatttccac
gcctccccccatggtcaccctcctcaccctctttctacaatgctggggctctacagactg
tcctcccccgtggggtctaccctccctcctggtatgggatccatgcggtctgccttcccc
aatcatggcggtcctccccccacctcctcaggcagccaccatgctctctctaacctgttg
gactccccctcggtccccacccctagcctcgccactagggtactgccaaagcctcccaac
actgcagaggactccaacgagactcaggatccctttggggacctactggccatggctaag
ccggccgctgcaccacctaaaaagaaggtggagggccttcgggggaagtgggagactttt
gactaa
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