Oncorhynchus tshawytscha (Chinook salmon): 112220052
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Entry
112220052 CDS
T05605
Symbol
zgc:55461
Name
(RefSeq) beta-tubulin family protein isoform X1
KO
K07375
tubulin beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112220052 (zgc:55461)
09144 Cellular community - eukaryotes
04540 Gap junction
112220052 (zgc:55461)
09142 Cell motility
04814 Motor proteins
112220052 (zgc:55461)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112220052 (zgc:55461)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112220052 (zgc:55461)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112220052 (zgc:55461)
04147 Exosome [BR:
otw04147
]
112220052 (zgc:55461)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112220052 (zgc:55461)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112220052 (zgc:55461)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112220052 (zgc:55461)
Exosomal proteins of colorectal cancer cells
112220052 (zgc:55461)
Exosomal proteins of bladder cancer cells
112220052 (zgc:55461)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
112220052
NCBI-ProteinID:
XP_024237385
LinkDB
All DBs
Position
LG20:37896203..37900388
Genome browser
AA seq
445 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaattgtgcatttgcaggctggtcagtgcggtaaccaaattggagcaaagttc
tgggaagtgattagtgacgaacatggcatcgaccccactggcacataccatggggacagt
gaccttcagctggagagaattaatgtgtattacaatgaagccacgggaggcaagtatgtc
ccccgtgcggtgttagtggacttggagcctggtacaatggactctgtgaggtcgggtccc
tttggacagatcttccgaccagacaacttcgtcttcggccaaagtggagctggaaacaac
tgggccaagggccactacacagagggagcagagctggtggactctgttttggatgtggtg
aggaaagaggcagagagctgtgactgtctacagggtttccagctcacccactccctgggc
gggggcacaggctcgggcatgggcaccctgctcatcagcaaaatccgcgaggagtacccc
gatcgtatcatgaacacgttcagtgtagtgccctcgcccaaagtatcagacactgtggtg
gagccctacaatgccaccctgtcagtccaccagctagtagagaacaccgacgagacctac
tgtattgacaacgaggctctgtatgacatctgcttccgtacccttaaacttaccacgccc
acctatggcgacctcaaccacctggtgtcagccaccatgagcggggtcaccacttgcttg
cgcttccctggccagctcaacgctgacctccgtaaactggctgtcaacatggtgcccttc
ccccgtctccacttcttcatgccgggcttcgcccccctgaccagcagggggagccagcag
tacagggccctcactgtgcccgagctcacccagcagatgttcgatgccaagaacatgatg
gcagcttgcgacccacgtcacggccgttacctcaccgtagctgcagtgttcaggggccgc
atgtccatgaaggaggtggatgagcagatgctgaacgtccagaacaagaacagcagctac
tttgtcgaatggatccccaacaacgtcaagaccgctgtctgcgacattcctccccgcggc
ctcaagatggccgccaccttcatcggcaacagtacggccatccaggagctgtttaagcgc
atctccgagcagttcaccgccatgttccgtcgtaaggccttcctccattggtacaccggg
gagggtatggacgagatggagttcactgaggctgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccaccgccgaggaggagggagagtttgaggaggaagga
gaggaggagctggcgtaa
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