Oncorhynchus tshawytscha (Chinook salmon): 112220067
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Entry
112220067 CDS
T05605
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112220067
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
112220067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
HEAT_EZ
Lentiviral_Tat
Motif
Other DBs
NCBI-GeneID:
112220067
NCBI-ProteinID:
XP_024237417
LinkDB
All DBs
Position
LG20:37504004..37529117
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AA seq
773 aa
AA seq
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MAAKAGDNPDSLMALSTAFCLRNLRRTMCYLGDGNKLCLRSDVFLPSEICDKLVNTYMEL
VHSDSNFEPQDGFFQLFSDPRSTRLTRVQLREDLVRDRDLEAIWKQDLIELHLTYCNSLS
ARSLKTLASFRQTLVSLSLFGCSHIFYRKGGAPLACNEDDEEEEEQQRPASRQALDTDFS
FQGFNRLRLLNLGGLPEEVDPEALLKPLPALTSLDLSGVQLPRAAFLAQWKERLASLVLY
NVDLSEELVNTVVELGHLRHLDISRERTSKFKMTRKILTAIVQGLVNLVSLDISGHIMLD
NCTVPHLEEAMGRPSIEPCKSSIYPFQELKRPLQFLGLYNTTLCNVTHIPAYKVTGSKNE
DQVLNAIEAYTEFRPELAHRAINQLFDIARIQHCSQLLRALQLVIAALKCHKYEKSVQVT
GSAALFYLTNTEYRSDQSMRLRRQVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELEF
QYGRVNLLLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQK
KLQDRMCDQVMEFSWSALWNITDETPDNCQMFLNCRGMSLFLDCLKEFPDKQELHRNMLG
LLGNVAEVRALRPQLLTPQFISVFSDLLDSKADGIEVSYNACGVLSHIVFDGPEAWGMEE
PLRDTVMDKMMAAIQSWDVTSRRNINYRSFEPILRLLPQSIAPVSQHWATWALFNLVSVY
PSKYCPLLVKEGGIVLLEKVLELQTSHEETKDMARKVMEQCENFKEDPMETAR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaagctggggacaaccccgacagcctcatggcgctgtccacggccttctgc
ctgaggaacctgaggaggaccatgtgctacctgggagacgggaacaagctctgcctgcgc
tcagatgtcttcctgcccagcgagatctgtgacaagctggtcaacacatacatggagctg
gtacattcggacagtaactttgagccgcaggacggcttcttccagctgttctcggacccg
cgcagcaccaggctcaccagggtgcagctgagggaggaccttgtgcgggacagggacctg
gaggccatttggaaacaggacttgatagagcttcacctcacctactgcaacagcctatca
gcacgcagcctaaagactctggccagcttccgccagaccctagtctccctcagcctgttc
ggctgcagccacatcttctaccgcaagggtggcgccccgctggcgtgcaatgaggacgac
gaggaagaagaggagcagcagcggcctgcctccagacaggcgctggacacagacttcagc
ttccagggcttcaaccggctgcggctgctcaacctggggggtctgcctgaggaggtggac
cctgaggccctgctcaagcccctgccagccctcacctctctggacctgtccggggtgcag
ctgcccagggctgccttcctggcccagtggaaggagaggctggcctccctggtgctctac
aacgtggacctgtcagaggagctggtcaacacagtggtggagctgggacacctcaggcac
ctggatatctcccgagagcgcacctccaagttcaaaatgacccgtaagatcctgacggcc
atcgtgcagggcctggtcaatctggtgtcgttggacatctcaggccacatcatgttggac
aactgcacagtcccacacctcgaggaggccatgggacgtccaagcattgagccctgcaag
agcagcatctaccctttccaggagctgaagagacctctgcagtttctggggctctataac
accactctttgtaatgtgacgcacatccctgcgtacaaggtcacaggctccaagaatgaa
gaccaggtcctgaatgccatcgaggcctacacagagttccgcccggagttggcccaccgt
gcaatcaaccagctgtttgacatcgccaggatacagcactgcagccagctactgcgggca
ctgcagctggtgattgctgcactgaagtgtcataagtacgaaaagagcgtccaggtgacg
ggcagcgcggccctcttctacctgaccaacactgagtaccgcagcgaccagagcatgagg
ctacgccggcaggtcatccaggtggtgctcaacggcatggagcagtaccaggaggtcacg
gttcagaggaactgctgcctgacactgtgtaacttcagcatccctgaggagctggagttc
cagtacggccgggtcaacctgctgctgctgaagatcctggagccggcccggcaggacgag
tccatccagcgcatcgctgtgcacctctgcaatgccctggtctgccaagtggacaaccat
cacaaggaagctgtgggcaagatgggcttcgtcaagacaatgttgaatctaatacagaaa
aagctacaggacaggatgtgtgaccaggtaatggagttctcctggagcgcactgtggaac
atcactgacgagactccagacaactgtcagatgttcctcaactgtaggggcatgagcctc
ttcctggactgcctgaaggagtttccagacaagcaggagctccaccgtaacatgctgggg
ctgctgggtaatgtggcagaagtgagggctctgcggccacaactcctcaccccacagttc
atctctgtcttcagtgacctgctcgacagcaaggcggatgggatcgaggtgtcctataac
gcgtgtggggtgctgtcccacatcgtgtttgatgggccagaggcatggggaatggaggag
ccgctgagggacacggtcatggacaagatgatggctgctatccagagctgggatgtcacc
tcccgccggaatatcaactacagatcctttgaacctatcctgcgcctgctgccccagagc
attgccccagtcagtcagcattgggccacgtgggcactcttcaacctggtgtcagtctac
ccgagtaagtactgccctctgctggtcaaggaaggcgggatcgttctcttggagaaggtg
ctggagctccagacatcacacgaagagaccaaggacatggcgcggaaagtgatggagcag
tgtgagaatttcaaagaagacccaatggaaacggcgaggtag
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