Oncorhynchus tshawytscha (Chinook salmon): 112220123
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Entry
112220123 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220123
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112220123
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Oscp1
YabA
DUF7809
DUF6809
Motif
Other DBs
NCBI-GeneID:
112220123
NCBI-ProteinID:
XP_024237540
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Position
LG02:19583684..19587502
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AA seq
405 aa
AA seq
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MERITSAQPPPCMAKHQSLEMADMQGKDFPKYVCKHRKGMKRVEDSKETYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIALQI
RDQSSVSSENSEEMFHSGFHVCAKEVLQYLANQGSSRDPLTPSEMISHLHKVASEVLQGP
FSPRSEEPTHKPIDSMEKPAGQMPKGKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYSKEEELKYALAERLAGGGVKQEGAEPQAKRLKSDYSEDESSSG
QVVSSHHSYMTFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPGGMPFLYPGMNVSAASLS
PEKIPQNLVMSPRAGSPTLYQAPMDSPALLQALKQXPPMNLESKD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcaaaacaccagtcgctggag
atggcagacatgcaaggaaaagatttcccaaagtacgtgtgcaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatacaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctaggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcattgcaaatc
agggatcagagcagtgttagctcagagaacagtgaggagatgttccactctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccccctg
accccctctgaaatgatcagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagcccccggtccgaagagcccacccacaaacccatcgatagcatggagaagcctgct
ggtcagatgcctaagggcaaggagggtcaccccaagaactttgtgtctgtcattcaaagg
acatacccccatggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacatgagaaacgggacctcaaagcccaacgctcaagctactacagcaaggag
gaagagctcaaatatgctctggctgagaggttggcaggaggtggcgtcaagcaggagggt
gctgagccccaggccaagaggttaaaatctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacatgaccttctcccaacaccagacccccctctgc
gtgcccttctacctcatcccccaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccagggggcatgccctttttgtacccgggcatgaatgtctcagcagccagcttgtct
ccagagaaaatacctcaaaacttagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccagccctccttcaagctttaaaacaangcccccccatgaac
ttggaatccaaagactga
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