Oncorhynchus tshawytscha (Chinook salmon): 112220131
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Entry
112220131 CDS
T05605
Symbol
psd3l
Name
(RefSeq) PH and SEC7 domain-containing protein 3 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112220131 (psd3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220131 (psd3l)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112220131 (psd3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
112220131
NCBI-ProteinID:
XP_042158602
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All DBs
Position
LG20:complement(41012676..41169287)
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AA seq
1413 aa
AA seq
DB search
MADHHHQVKTSFLFIRLQSPSKAHDLPYPADTASSIATEEGGSTNNSAGAIVTSTSVAAA
PIPPDHIEDCSVTALRVDINSNQEVDEKARERGETSDYSAHAGDVASVVSGDPQTQNYQN
LLLKADLESVTGLQDHSLSTSESDFPVWVLREDSPQTMMNKDNQQPLAGTPTIATNPAPP
SQAYSAAPRVSFLHPAEGSVPDTHGPKATEMEMDKPSQKPFHQAPAPAPAPTQPNVAPSP
HCPSSTNSWVSSAKQKEAGEKPRGPQSGSQVFLRSPEERKTFLYAVKERSSKVPGDTYRN
AVTRSLSTSIAVTQSSVVTSPASSSEPSVVSSAMSKPTVSTVAAPSSVISAARPSMIKPV
PAQKAETFVWVNSSSSHAQSVAKAKYQFLFGKGDETSSTESVSASTSHVLADEGSSSTSL
DTGLQDDDIDETSLFLEIDRELANLLSGLSARSQNAPAAHAQPVDSLHPADSSEQQSAAI
MIPCSGQNGASQDVASRTSERNGEGEETNVDLDMSGLGLVPPGDPLLSPTFLLDSWTEAL
LKDTASLSSAAQKALGVSTVAAEVNGDFRNAPAANCQEKTSAGLTAAAFTSGPCSGAGEV
PVVDQSEPPRRGSEAATEPAGGGLLLDEESLEESSKILAEIPGIFTAFLDGGQLREKPPK
KLRFAESRPGSTTTVVAATDVCGQMGHERGSEDSEKGLEGGRSCSSLKVESSVDSLSPLE
RLPCRLSLEDEVFRVLPDIFLHQSPDGDAAREPSSDRSTKTNGSEDLSDNRDGKETSESQ
EATDVFSSQFESILESDRFRSTLYSSLDSLDALSSSADDEADSGFTFDMPLTPMIQQRLK
ETGHFVELLPDAGRQRERQELLSVTTTGKGGKAALEVTSSYLEEVVASGDPAFSGQSDKH
SSGPLANGVERDPKDWLHGCLSSDAGLKTALSDWDSDMGSTERLKDSTDTLLNGNRGDQE
GAQRLARRLYHLEGFRRSDVAKHLGKNNDFSKMVAEEYLTFFEFTGMTLDQSLRSFLKAF
ALIGETQERERVLIHFSNRYYQCNPTVISSQDGAHCLTCALMLLNTDLHGHNIGKKMTCQ
EFINNLEGLNGGQDFPRELLKALHNSIKNDKLEWAIDGDELKKSLSELADNKDNKSITRI
SSGSNPFLDIAHDPNAAVYKTGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGMILYLQK
DEYKAEKALSEEDLKNAISIHHALSIKAVDYEKKPNVLKLKTADWRVFLFQAQSPEEMDS
WIRVVNSVAAMFSAPSFPAAIGSQKKFSRPLLPATTTRMSQEEQLKSHEAKLKHVSTELA
EHRSYPPDKKVKAKEIDEYRLKEHYLEFEENRYEMYVKLLREGVKELLIGKDGDAGLKKS
QSSPSLNQEGQPAAAKVKRNTSERRPETPPKVT
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcatcatcatcaggttaagacttccttcctctttattcgactgcagtcgccc
tctaaggcccatgacctgccgtatcctgctgacactgccagctccatcgccacagaggaa
ggagggtcgacgaacaactcggctggagctatagtgacatccacatctgtagccgcagca
cccatcccacctgaccacatagaggactgcagtgtcacagccttgagagtagacatcaac
tcaaatcaagaagtagacgaaaaagccagagagagaggggaaacatccgattattcagct
catgctggagatgtggcttcggtcgtctcaggagaccctcagactcagaactaccagaat
ttattgttgaaagctgatctggaatcagtgactggattacaggatcatagtctcagtacc
tcggagtcggatttccctgtttgggtcctgcgggaggacagtcctcagacaatgatgaac
aaggacaatcaacagccactagcggggacaccaaccatcgccaccaacccagcacccccc
tctcaagcttattctgcagcaccacgagtaagcttcctgcacccagcagaaggatccgtg
cccgacacccacgggcctaaggccactgagatggagatggacaagccaagccagaagcct
ttccaccaggccccggccccagccccagcacctacccaacccaacgtggctcccagcccc
cattgccccagcagcactaacagttgggttagcagtgcaaagcagaaggaggctggtgag
aagccaagaggtccacagagtggttcacaagtgttccttagaagtccagaagagcgcaag
acctttctgtatgcagtcaaggagaggtcctcaaaggtacctggagacacgtacaggaac
gcagtgacaaggagtctctccacatctatagctgtcactcaatccagtgttgtgacctca
ccggcttcttcttcagagccttctgtggtgagctcagctatgtcaaaacccacagtctca
acagttgctgctccatcctctgtgatcagtgctgctcgtccctccatgataaagcctgtt
ccagctcagaaggctgaaacgtttgtttgggttaacagctcgtcttcacacgctcaaagt
gttgcgaaggccaagtaccagtttctctttggaaaaggagacgagaccagctctactgaa
agcgtttcagcatcaacctctcacgtcttagcggacgaggggagtagtagcaccagtcta
gacaccggtctccaggacgatgacatcgatgaaacctcgctgttcctggagatcgaccgt
gagctggccaacctgctgagcggcctcagcgccaggagccagaatgctccagccgcccac
gcccaacctgtggacagcctacacccagcggacagtagtgaacagcagagcgcagccatc
atgatcccctgtagcggtcaaaacggggcctcgcaggatgtggccagccggacctcagag
agaaacggtgagggggaggagaccaatgtggacctggacatgtctggcctgggccttgtt
ccaccgggagacccactcctctcgcccaccttcctcctggactcgtggacggaggcgctg
ctgaaagatacggcttccctgagctccgcggcccagaaggccttgggcgtctccaccgtg
gcggccgaggtaaacggagacttcaggaatgcgcccgctgcgaactgccaagaaaaaaca
agtgccggcctgacagctgctgcattcacatctgggccatgctcaggggcgggtgaggta
cccgtggtggaccagtctgaacctcccaggaggggttcagaggcagcgaccgagcctgcc
ggaggggggctgctcctggacgaggagtccctggaggagtccagtaaaatcctggccgag
atcccaggcatcttcaccgccttcctagacgggggccagctgagggagaagccccctaag
aaactgcgatttgcggagagccggccagggagcacgacgacggtggtggcggcaacagac
gtttgtggtcagatgggacatgagcgaggtagtgaggactcggagaagggactggaggga
ggtaggagctgcagcagtctgaaggtagagagctctgtggacagtctgagtcctctagag
agactcccctgccggctgtccctggaggacgaggtgttccgggtgctccctgacatattt
ctgcaccagagccctgatggagacgcggcacgggagcccagctcagataggagtacgaag
accaatggcagcgaggacctgtcggataaccgggatggcaaggagacatcggagagccag
gaggccaccgacgtcttcagctcgcagttcgagagcatcctggagtcagaccgtttccgt
agcaccctttacagcagcctggactctctggatgccctatcctcctcggctgacgacgag
gcggattcgggcttcactttcgacatgccccttactcccatgatccagcaacgcctcaag
gagacgggccacttcgtggagttgttgcccgacgcggggcgccagcgggagcgccaggag
ctactcagcgtcacgaccacggggaagggagggaaagccgccctggaagtgacgtcttcc
tacctagaggaggtggtagcgagtggggaccccgctttcagcggccaatcagataaacat
tccagcggacccctggccaatggggtggagcgggacccaaaggactggctgcacggctgc
ctgagcagtgatgcagggctgaagacggcgctgtcggactgggactcagacatgggcagc
acggagcggctgaaggacagcacggacacactgctcaatggaaaccgaggagaccaagag
ggggcccagcgcctcgcacgacggctctaccacctggagggctttcgccgctccgacgtg
gccaagcacctgggaaagaacaatgacttcagcaagatggttgctgaagagtaccttaca
ttttttgaatttacagggatgacattggaccaatctctcagatctttcttgaaagctttt
gcactaataggcgaaacccaggagagagaacgggttttgatccacttttccaataggtac
tatcaatgtaaccccaccgtcatctcctcacaagatggagcccattgccttacatgtgct
ctgatgctgttgaacacggaccttcatggccataatatcgggaagaagatgacgtgccag
gaattcatcaataacctggaagggttaaatggaggacaagatttcccccgagagctctta
aaggccttgcacaactcaatcaaaaacgacaagctggaatgggccatagatggcgatgag
ctgaagaagtctctgtctgagctggcagacaacaaggacaataaaagtatcacgcggatc
agcagtggcagtaaccccttcctggacattgcccacgaccccaacgccgcagtctacaaa
acaggcttcctggcccgcaaaatccacgccgacatggacggcaagaaaacaccaagagga
aagcgaggctggaaaacattctacgctgttctcaaaggaatgatcctctacttgcagaag
gacgaatacaaggctgagaaggccctctcagaggaggacctaaagaatgccatcagcatc
caccacgccttgtccatcaaagccgtggactacgagaagaagcccaacgttctcaagctc
aagacagccgactggagggtcttcctcttccaggcccagagcccagaggaaatggactct
tggatcagagtagtcaactctgtggcagccatgttctctgccccctcgttccccgctgcc
attggctctcagaagaaattcagccgtccactgctaccggccaccaccacgaggatgtca
caggaggaacagctgaagtctcacgaggcgaagctgaagcacgtttccacagagctggca
gagcacagatcctaccctcctgacaagaaggttaaagccaaggagatcgacgagtaccga
ctcaaagagcactacctggagtttgaggagaaccgctatgagatgtacgtcaagctcctg
agggagggcgtaaaggagctgctcattggcaaagatggcgacgcaggcctcaagaagtcc
cagtccagcccctctctcaaccaggagggccagccggccgcggccaaagtcaaacgcaac
acctcggagaggagacccgagacgccgcccaaggtcacatag
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