Oncorhynchus tshawytscha (Chinook salmon): 112220164
Help
Entry
112220164 CDS
T05605
Symbol
trnt1
Name
(RefSeq) CCA tRNA nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112220164 (trnt1)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
112220164 (trnt1)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
112220164 (trnt1)
Prokaryotic type
112220164 (trnt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
112220164
NCBI-ProteinID:
XP_024237616
LinkDB
All DBs
Position
LG02:19208117..19216726
Genome browser
AA seq
430 aa
AA seq
DB search
MWGRILNPVVISRVRLTWSARSLFTMQLKTTEFKSLFSDGLNGIAELFEKHKFELRIAGG
AVRDLLSGERPEDVDFATTATPEEMKSMFQNAGIRMINNKGEKHGTITARLHNENFEVTT
LRVDVETDGRHAEVEFTTDWQKDAERRDLTINSMFLGLDGTLYDYFQGYEDLKNRKVQFV
GCAEQRIQEDYLRILRYFRFYGRVSVKAAEHDPATLEAIRENARGLAAISGERIWVELKK
MVVGNHAAHLLKVMYELGLAQYIGLPVEGDVEEMKRIWQHVKDHSPKPVTVLSALFRCSQ
DVEKMDLRLKVSREEKNLGLFLVKHRQDLHKSQDDPDSLKPYTDFIIDSREVDAQSKVCE
LLKYQGEDKLLAEMSRWSIPRFPVSGHDLRKMGITSGKEIGTTIQNLRDVWKRSRYQMDK
DELLCHVNKT
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggagaatcctgaatcctgtggtgattagcagagttcgtctcacttggagtgcc
agaagtctcttcaccatgcagctgaagactacagagttcaagtccttattcagcgatgga
ctgaatggcatagcagagctctttgagaagcacaagtttgagctgaggatagcagggggt
gctgtgagggacctcttgtctggggagcggccagaggatgtggactttgcgaccacagca
acaccagaggagatgaagagcatgttccagaatgcagggatcaggatgatcaacaataaa
ggggagaagcatgggaccatcactgctcgacttcacaatgaaaactttgaagtgaccaca
ctgcgtgtagatgttgagacggatggacgtcatgcagaggtagagttcacaacagactgg
caaaaagacgcagagcgtagagacctcaccatcaactccatgtttttagggttagatggg
accctatatgattacttccaaggatatgaggacctcaagaaccgaaaggttcagtttgtt
ggctgtgctgagcaaaggattcaggaggactacttgagaatactacgatacttcaggttt
tatggccgggtgtcagtaaaggcagcggaacatgaccctgccaccttggaggccatcagg
gaaaatgcccgtggcctggcagccatatcaggggagcgcatctgggttgagctgaagaag
atggtggtgggtaaccatgctgcccacctactaaaggtcatgtatgagctgggcctggct
cagtacataggtttacctgtagagggcgacgtggaggagatgaagcggatctggcagcat
gtgaaggaccattctcccaagcccgtgactgttctgtcggccctgttccgctgctcccag
gatgtggagaagatggacctgaggctgaaggtctccagggaggagaagaacctgggtctg
ttcctggtcaaacacagacaggacctccataagtcccaggatgatccagacagcctgaag
ccctacactgactttatcatcgatagtcgggaggtggatgctcagagtaaagtatgtgaa
ctgctcaagtaccagggagaggacaagttactggcagagatgagcagatggtccattcct
cgcttccccgtgagtgggcatgacttgaggaagatgggcatcacctctggcaaggagatc
ggtactaccatacagaacctacgagacgtgtggaaaaggagccgttaccagatggacaaa
gacgagctgctttgtcatgttaacaagacataa
DBGET
integrated database retrieval system
