KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112220187
Entry
112220187         CDS       T05605                                 
Name
(RefSeq) integrin alpha-4-like
  KO
K06483  integrin alpha 4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecules
otw04672  Intestinal immune network for IgA production
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112220187
   04514 Cell adhesion molecules
    112220187
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112220187
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112220187
   04810 Regulation of actin cytoskeleton
    112220187
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    112220187
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112220187
   04515 Cell adhesion molecules [BR:otw04515]
    112220187
   04090 CD molecules [BR:otw04090]
    112220187
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112220187
  Exosomal proteins of other cancer cells
   112220187
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin alpha subunits
   112220187
CD molecules [BR:otw04090]
 Proteins
  112220187
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP_3
Other DBs
NCBI-GeneID: 112220187
NCBI-ProteinID: XP_024237643
LinkDB
Position
LG07:15710863..15736783
AA seq 1079 aa
MTTYGLGLHSIGLNMLFCFLLRHADLYNLDIPHAIPLSGPNGTFFGYSVLLHKHQQQTWV
IVGAPVANSRFNQAVRNPGAIYKCKITDKKDCEQIQLGVMLDMPCGRHCSAEVENQWLGV
SLSRRQQDGLVLACGHRWKNVYFTKKEDLNKLPHGVCYKLESDLNQSSPLIPCYRDHENK
FGNDFASCQAGISNVLIGDLIVMGAPGTLYWTGSVFVHNISSQITSAYLDDNVVLYGSYL
GYSVSAGHFLHPNSTEVVGGAPQYGQTGRAYIFSIESSTLSIISEVKGQKLGSYFGGTVC
AVDLNTDGLSDLLVGAPMFSTVREEGRVYIYMNQGQANMKEMEFTLAGRDSYAARFGESI
TSLGDIDDDGYPDVAVGAPQEDDLHGAIYIYNGRKTGLGQYFSQRIAGSALGSAFKMFGQ
SVSGGIDVDGNGYPDVAVGAFLSDSAVVLRTRAVVVVEAMILLPPSVNRTHALCTENGQP
AICLKTSVCFQLYAKRVSGLIEILYNLTADVKHIEGLQSRFFFNTNGTELSNATAGSIKT
RHGHMTCVTHLAFLRRDIRDIFTPIHFELQYELGEHNVVRDNSKSFPPLRPMLQRGEEYS
NLLTNKTVFTRYCAWANCSTNLQVSAQLLLLRTHRDMPYVALGEGKTILLNVTLSNAGDA
AFLPMLHLRYPSNLYFIKVLDAEEKYVSCKIAEEEKRSVGLDCSVGNLFFNTLAKVNISF
LLDVSADSEPGDLNIIINATRENLENEDLLHDNIVNLTLLLRYGVNLNIHGFVSRTEFVF
GDFEEPHCSAERFKYTFKVVNVGPSISHGTRVEIDIPKALAPYPYRLLNILDIQSSSGWC
YIRNSTDGTRSTHGTMYGSQRASTIDSVWLNVTTTTDSYWTNRSSTTHPYWTNISSTTDT
NWTSISYWANVRNWTTVIEDECDLPDSNPLNDFFFFFSKSSRRHMYCMKEDALCLYAVCE
LGDMDIGKDVTIEMEVEMNSGVLDISPGRHSVMLLETTAVISPKKDPFIWFLKEDPITVV
VLEAHHSHKLKRVIELSIIVASLLLGLFILALLVICMWKSGFFKREDKMENIQRLSWDY
NT seq 3240 nt   +upstreamnt  +downstreamnt
atgactacatacgggctaggcttacacagcatagggctaaacatgttgttttgctttctc
ttacgtcatgccgatttgtacaatttagacataccgcacgctattccactcagtggtccg
aatggaacattttttggatattctgtgttgctacacaagcatcagcaacagacatgggta
atagttggcgcaccagttgcaaattcaaggttcaaccaggctgtcaggaatcctggagca
atctacaagtgcaaaattacagacaagaaggactgtgaacagattcaactcggtgtaatg
cttgacatgccctgtggcagacactgttctgctgaggttgaaaaccagtggcttggtgtg
agcctctccaggcggcagcaggatggacttgtgttggcctgtggacatcgttggaaaaat
gtctacttcaccaaaaaagaagatctaaataagttgccacatggcgtatgctacaaattg
gagtctgacttgaatcaatcaagtcctttgattccatgctacagagatcacgaaaataag
tttggcaatgactttgcatcatgtcaagcagggatttcaaatgtccttattggggacctc
atagtaatgggagcccctggaaccttgtattggactgggtctgtttttgtccacaacata
tccagtcagatcacttctgcctacttggatgataacgttgtcctctatggaagttatttg
gggtactcagtcagcgctggccacttcctgcacccaaactccactgaggtagtgggtgga
gccccccagtacgggcagactggaagagcctacatctttagcatagagtccagcacactg
agcatcatctctgaggttaaaggtcaaaagctgggttcctattttgggggcactgtgtgt
gcagtggacctgaacactgatggcctgtctgacctgctggtgggagctccaatgttcagc
actgtgagggaggagggccgtgtgtacatctacatgaaccagggacaggctaacatgaag
gagatggagtttacattagcagggagagattcatatgcagcccggtttggggaaagtatc
acaagtcttggagatattgatgatgatggctatccagatgttgcagttggggcaccacaa
gaggatgacctacatggtgctatttatatctacaatgggaggaagacgggacttggacaa
tacttttctcaaaggattgctgggtctgccttgggtagtgctttcaagatgtttggccag
tctgtgtctgggggcattgatgttgatggaaacggttacccagatgtggccgtgggagcc
tttctgtccgactctgctgttgttctgaggacacgggcggttgttgtggtggaggcgatg
atacttcttcctcctagtgtgaaccgcacccatgccctgtgtacagagaacggccagcct
gccatttgcctcaaaacctctgtgtgcttccagttgtatgcgaaacgtgtctctgggctt
atcgaaatactgtacaacctgacggctgatgtcaagcacatagaggggctccagtccaga
ttcttcttcaacaccaacggcacagagttatcaaatgccacagcaggcagcatcaagacc
aggcatggccacatgacctgtgttacccatctggcctttctgaggagagacattcgggac
atcttcacccccatccactttgagctgcagtatgagctgggagagcacaatgtggtgagg
gataactccaagagctttccccctctcaggcctatgctccagaggggagaggagtacagc
aacttgctgaccaacaagactgtattcaccaggtactgtgcctgggccaactgttccacc
aatctgcaagtgtctgcacagctgctgttactgaggacacatagagacatgccatacgtt
gccctgggggaggggaagaccattctactgaatgttacgctgtccaatgctggcgacgcc
gccttcctccccatgcttcacctgagataccccagcaatctctacttcatcaaagtgttg
gacgctgaggagaaatacgtgagctgtaaaattgctgaggaagagaagagaagtgtcggg
ctagattgcagcgtgggaaatttgtttttcaacaccttagccaaagttaatatcagcttt
ctgctggatgtcagtgctgacagtgaacctggtgacctgaacattataatcaatgcaacc
cgggagaatttagaaaatgaagatcttctccatgacaatattgttaatctgactctgcta
ttgagatatggagtgaatctaaacatccacggttttgtatcccgaacagagtttgtgttt
ggggactttgaggagccacactgctccgctgagaggttcaaatacaccttcaaggttgtc
aatgttggtccaagcatatctcacggcacaagagtggaaattgatatccccaaagcttta
gcaccgtatccatacagactgctcaacattttggacatacagtcatcttctgggtggtgt
tacattcgaaactccactgatgggaccagaagtacacatggcaccatgtatggaagccag
agagccagtaccattgacagtgtttggttaaatgtgacaactaccactgacagctattgg
acgaataggtccagcaccacacacccttattggactaatatttccagtaccactgacacc
aattggactagtatatcctattgggccaatgtgagaaactggaccactgttattgaggat
gagtgtgatctgcctgactccaatcccttgaatgatttcttcttcttcttctcaaaaagc
agtagaagacatatgtattgtatgaaagaggatgctctgtgtctgtacgcggtgtgtgag
cttggagacatggacattgggaaagatgtcaccattgaaatggaggtcgaaatgaattcg
ggagttttagacatctcaccgggaagacatagtgtcatgctgttagagaccactgctgtc
atatcacccaagaaggacccatttatttggttcttaaaagaagaccccatcacagtggtt
gtcctggaggcccatcatagccacaaactgaaacgagtcattgagctgtccatcatcgtg
gccagtctcttactaggcctcttcatccttgccttgctggtcatctgcatgtggaagagt
ggcttctttaagcgtgaggataagatggagaatatacaaaggctcagctgggactactga

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