Oncorhynchus tshawytscha (Chinook salmon): 112220187
Help
Entry
112220187 CDS
T05605
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04514
Cell adhesion molecules
otw04672
Intestinal immune network for IgA production
otw04810
Regulation of actin cytoskeleton
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112220187
04514 Cell adhesion molecules
112220187
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112220187
09142 Cell motility
04820 Cytoskeleton in muscle cells
112220187
04810 Regulation of actin cytoskeleton
112220187
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
112220187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112220187
04515 Cell adhesion molecules [BR:
otw04515
]
112220187
04090 CD molecules [BR:
otw04090
]
112220187
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112220187
Exosomal proteins of other cancer cells
112220187
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112220187
CD molecules [BR:
otw04090
]
Proteins
112220187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
112220187
NCBI-ProteinID:
XP_024237643
LinkDB
All DBs
Position
LG07:15710863..15736783
Genome browser
AA seq
1079 aa
AA seq
DB search
MTTYGLGLHSIGLNMLFCFLLRHADLYNLDIPHAIPLSGPNGTFFGYSVLLHKHQQQTWV
IVGAPVANSRFNQAVRNPGAIYKCKITDKKDCEQIQLGVMLDMPCGRHCSAEVENQWLGV
SLSRRQQDGLVLACGHRWKNVYFTKKEDLNKLPHGVCYKLESDLNQSSPLIPCYRDHENK
FGNDFASCQAGISNVLIGDLIVMGAPGTLYWTGSVFVHNISSQITSAYLDDNVVLYGSYL
GYSVSAGHFLHPNSTEVVGGAPQYGQTGRAYIFSIESSTLSIISEVKGQKLGSYFGGTVC
AVDLNTDGLSDLLVGAPMFSTVREEGRVYIYMNQGQANMKEMEFTLAGRDSYAARFGESI
TSLGDIDDDGYPDVAVGAPQEDDLHGAIYIYNGRKTGLGQYFSQRIAGSALGSAFKMFGQ
SVSGGIDVDGNGYPDVAVGAFLSDSAVVLRTRAVVVVEAMILLPPSVNRTHALCTENGQP
AICLKTSVCFQLYAKRVSGLIEILYNLTADVKHIEGLQSRFFFNTNGTELSNATAGSIKT
RHGHMTCVTHLAFLRRDIRDIFTPIHFELQYELGEHNVVRDNSKSFPPLRPMLQRGEEYS
NLLTNKTVFTRYCAWANCSTNLQVSAQLLLLRTHRDMPYVALGEGKTILLNVTLSNAGDA
AFLPMLHLRYPSNLYFIKVLDAEEKYVSCKIAEEEKRSVGLDCSVGNLFFNTLAKVNISF
LLDVSADSEPGDLNIIINATRENLENEDLLHDNIVNLTLLLRYGVNLNIHGFVSRTEFVF
GDFEEPHCSAERFKYTFKVVNVGPSISHGTRVEIDIPKALAPYPYRLLNILDIQSSSGWC
YIRNSTDGTRSTHGTMYGSQRASTIDSVWLNVTTTTDSYWTNRSSTTHPYWTNISSTTDT
NWTSISYWANVRNWTTVIEDECDLPDSNPLNDFFFFFSKSSRRHMYCMKEDALCLYAVCE
LGDMDIGKDVTIEMEVEMNSGVLDISPGRHSVMLLETTAVISPKKDPFIWFLKEDPITVV
VLEAHHSHKLKRVIELSIIVASLLLGLFILALLVICMWKSGFFKREDKMENIQRLSWDY
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgactacatacgggctaggcttacacagcatagggctaaacatgttgttttgctttctc
ttacgtcatgccgatttgtacaatttagacataccgcacgctattccactcagtggtccg
aatggaacattttttggatattctgtgttgctacacaagcatcagcaacagacatgggta
atagttggcgcaccagttgcaaattcaaggttcaaccaggctgtcaggaatcctggagca
atctacaagtgcaaaattacagacaagaaggactgtgaacagattcaactcggtgtaatg
cttgacatgccctgtggcagacactgttctgctgaggttgaaaaccagtggcttggtgtg
agcctctccaggcggcagcaggatggacttgtgttggcctgtggacatcgttggaaaaat
gtctacttcaccaaaaaagaagatctaaataagttgccacatggcgtatgctacaaattg
gagtctgacttgaatcaatcaagtcctttgattccatgctacagagatcacgaaaataag
tttggcaatgactttgcatcatgtcaagcagggatttcaaatgtccttattggggacctc
atagtaatgggagcccctggaaccttgtattggactgggtctgtttttgtccacaacata
tccagtcagatcacttctgcctacttggatgataacgttgtcctctatggaagttatttg
gggtactcagtcagcgctggccacttcctgcacccaaactccactgaggtagtgggtgga
gccccccagtacgggcagactggaagagcctacatctttagcatagagtccagcacactg
agcatcatctctgaggttaaaggtcaaaagctgggttcctattttgggggcactgtgtgt
gcagtggacctgaacactgatggcctgtctgacctgctggtgggagctccaatgttcagc
actgtgagggaggagggccgtgtgtacatctacatgaaccagggacaggctaacatgaag
gagatggagtttacattagcagggagagattcatatgcagcccggtttggggaaagtatc
acaagtcttggagatattgatgatgatggctatccagatgttgcagttggggcaccacaa
gaggatgacctacatggtgctatttatatctacaatgggaggaagacgggacttggacaa
tacttttctcaaaggattgctgggtctgccttgggtagtgctttcaagatgtttggccag
tctgtgtctgggggcattgatgttgatggaaacggttacccagatgtggccgtgggagcc
tttctgtccgactctgctgttgttctgaggacacgggcggttgttgtggtggaggcgatg
atacttcttcctcctagtgtgaaccgcacccatgccctgtgtacagagaacggccagcct
gccatttgcctcaaaacctctgtgtgcttccagttgtatgcgaaacgtgtctctgggctt
atcgaaatactgtacaacctgacggctgatgtcaagcacatagaggggctccagtccaga
ttcttcttcaacaccaacggcacagagttatcaaatgccacagcaggcagcatcaagacc
aggcatggccacatgacctgtgttacccatctggcctttctgaggagagacattcgggac
atcttcacccccatccactttgagctgcagtatgagctgggagagcacaatgtggtgagg
gataactccaagagctttccccctctcaggcctatgctccagaggggagaggagtacagc
aacttgctgaccaacaagactgtattcaccaggtactgtgcctgggccaactgttccacc
aatctgcaagtgtctgcacagctgctgttactgaggacacatagagacatgccatacgtt
gccctgggggaggggaagaccattctactgaatgttacgctgtccaatgctggcgacgcc
gccttcctccccatgcttcacctgagataccccagcaatctctacttcatcaaagtgttg
gacgctgaggagaaatacgtgagctgtaaaattgctgaggaagagaagagaagtgtcggg
ctagattgcagcgtgggaaatttgtttttcaacaccttagccaaagttaatatcagcttt
ctgctggatgtcagtgctgacagtgaacctggtgacctgaacattataatcaatgcaacc
cgggagaatttagaaaatgaagatcttctccatgacaatattgttaatctgactctgcta
ttgagatatggagtgaatctaaacatccacggttttgtatcccgaacagagtttgtgttt
ggggactttgaggagccacactgctccgctgagaggttcaaatacaccttcaaggttgtc
aatgttggtccaagcatatctcacggcacaagagtggaaattgatatccccaaagcttta
gcaccgtatccatacagactgctcaacattttggacatacagtcatcttctgggtggtgt
tacattcgaaactccactgatgggaccagaagtacacatggcaccatgtatggaagccag
agagccagtaccattgacagtgtttggttaaatgtgacaactaccactgacagctattgg
acgaataggtccagcaccacacacccttattggactaatatttccagtaccactgacacc
aattggactagtatatcctattgggccaatgtgagaaactggaccactgttattgaggat
gagtgtgatctgcctgactccaatcccttgaatgatttcttcttcttcttctcaaaaagc
agtagaagacatatgtattgtatgaaagaggatgctctgtgtctgtacgcggtgtgtgag
cttggagacatggacattgggaaagatgtcaccattgaaatggaggtcgaaatgaattcg
ggagttttagacatctcaccgggaagacatagtgtcatgctgttagagaccactgctgtc
atatcacccaagaaggacccatttatttggttcttaaaagaagaccccatcacagtggtt
gtcctggaggcccatcatagccacaaactgaaacgagtcattgagctgtccatcatcgtg
gccagtctcttactaggcctcttcatccttgccttgctggtcatctgcatgtggaagagt
ggcttctttaagcgtgaggataagatggagaatatacaaaggctcagctgggactactga
DBGET
integrated database retrieval system