Oncorhynchus tshawytscha (Chinook salmon): 112220236
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Entry
112220236 CDS
T05605
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112220236
04371 Apelin signaling pathway
112220236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220236
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112220236
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
112220236
NCBI-ProteinID:
XP_042158403
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Position
LG20:complement(29945792..29983010)
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AA seq
477 aa
AA seq
DB search
MGRKKIQIARIMDERNRQVTFTKRKFGLMKKAYELSVLCNCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDIEADDSAGQSPESEDKYRKI
NEDIDLLISRQRLCQALPPPNYDIVGSIQGQNNSGLLYSHPGVGGSLYNHSLLPLCQTHS
GLQRNSMSPGPQHTHQPPSAGNSGGMMGSELSNTVSNAGSGNYGNHRISPGLLSQGGMAN
TSPPMIQAKTSPPMNSMTLIGNRKPDLRTLLPPGNKNNMPSINQRINHSQSAQTLATPAV
SIATPTLPGQGIVGYPSALSTSYDTEYSLGDLSGFGNRSGSLHLGSVTGWQQQPLQNIQH
SALGHMGNICQNSNLNLQNVHQNLYIKSEPTSPPRDRGIGFVNGGMGGVSHGYPTNQGPA
EAGQSPGDSLSSCGSSYDGSDREDHRGNDNFLLHPMSNQERHSPSLKRMRLSKCWAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatagcacggattatggatgaacgtaacagacaggtgaca
ttcacaaagcggaagtttggcctgatgaagaaggcgtatgagctgagtgttctgtgtaac
tgtgagatcgccctcatcatcttcaacagcaccaataaattgttccagtatgccagcact
gacatggacaaggtcctgctcaaatacacagagtacaacgaacctcacgagagcaggact
aactccgacatcgtggaaactctgcgtaagaagggtctaaatggttgtgacagtcccgac
atcgaggcagacgactctgctggtcagagccccgagtcagaggacaaataccgcaaaatc
aatgaagacattgacctcctgatcagcagacagagactctgtcaggctctccccccgcct
aactatgacatagttggctccatccagggccaaaacaacagtggactactatactctcac
cccggggtggggggatccttgtataaccacagtcttctgcctctttgccaaacacactct
ggcctgcagaggaacagcatgtcgcctggaccccaacacacacaccaaccccccagtgct
ggaaactcaggagggatgatgggttcagagctgtctaacaccgtctccaacgctggtagt
ggtaactatggtaaccaccgtatctcaccggggctgttatctcaaggaggcatggccaac
acttcacccccgatgattcaggccaagacttcgcccccgatgaactccatgaccctgatt
ggcaaccgcaagccggacctccgcacgctgctaccccctggcaacaagaacaacatgccc
tccatcaaccagagaataaaccactcccagtctgcccagacattggctacccccgcagtc
tccatagcaacacctactctgcccgggcagggtattgtagggtacccctctgccctctcc
acctcatatgacacagagtactctctgggtgacctgtcagggtttggtaacagatcagga
tctctccacctgggatcagtaacaggctggcagcaacaaccgctacagaatatacagcac
tcagcactgggacacatgggaaacatttgtcagaactccaaccttaacctccagaatgtc
catcagaacctctacatcaagtcagagcccacctccccgcccagagatcgaggcatcgga
tttgtcaacggagggatggggggtgtgtcccatggctacccaacaaatcagggccccgcg
gaggcagggcagtctcctggcgacagcctatccagctgtggcagctcatacgatggcagt
gatcgagaggatcaccgcggaaatgacaacttcctgctacacccgatgtccaatcaggag
cgccacagcccgtccctcaaacgaatgcgcctatcaaaatgctgggctacatga
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