Oncorhynchus tshawytscha (Chinook salmon): 112220238
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Entry
112220238 CDS
T05605
Name
(RefSeq) septin-5
KO
K04557
septin 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220238
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112220238
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
112220238
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
112220238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
VapE-like_dom
Ras
ABC_tran
ABC_transp_aux
Roc
AAA_16
Dynamin_N
nSTAND3
AAA_22
nSTAND1
AAA_29
NACHT
Motif
Other DBs
NCBI-GeneID:
112220238
NCBI-ProteinID:
XP_042158406
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All DBs
Position
LG20:complement(30033985..30060437)
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AA seq
371 aa
AA seq
DB search
MTSNTRYKTRALRSEDGREEKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLV
NSLFLTDLHKDRKLLSAEERISQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTEC
WRPITDYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFIPPFGHGLRPVDIEFMKALQDK
VNVVPLISKSDCLTPNEIRKLKDRVREEIDKFGIKVYQFPDCDSDEDEEAKQKDRELKES
TPFAVIGSNMVVETRGQKVRGRLYPWGIVEVENQSHCDFVKLRTMLIRTHMHDLKDITCD
CHYENYRAHCIHTMTSKMNTDNRVESPIPILPLSTPDVETEKLIKMKDEELRRMQEMLQK
MQQQMQHEQDL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaacaccaggtacaagacccgagcactcagatcagaggatggaagagaggag
aaggagtatgtggggtttgccaccctccccaaccaggtccacaggaagtcagtcaagaag
gggtttgacttcaccctcatggtggcaggagagtctggtctgggtaaatctactctggtc
aacagccttttcctcacagacctgcacaaggacaggaaactcctcagtgccgaggagcgt
atcagtcagacagtggagatcactaagcacacggtggacatagaggaaaaaggagttaaa
ctgaaactgaccatcgtagacacaccagggtttggagacgcagtcaacaacactgagtgt
tggaggccaatcacagattacattgaccagcagtttgagcagtacttcagagatgagagt
ggactgaacaggaagaatatccaggacaacagagtccactgctgcctctacttcataccc
ccctttggacacgggcttcgtccagtagatatagagtttatgaaggctctgcaggacaag
gtcaacgtggttcctctcatctctaaatctgactgccttactcccaacgagatcaggaaa
cttaaagaccgggtccgtgaggagatagataagtttgggataaaggtgtaccagttccca
gactgcgactctgatgaggatgaggaggccaaacagaaggacagagaactcaaggagagc
actccgtttgctgtgatcggcagtaacatggtggtggagaccagaggtcagaaagtcaga
gggagactctacccctggggcatcgtagaggtggagaaccagtctcactgtgactttgtg
aagctgaggaccatgctgatcaggacccacatgcatgacctgaaggacatcacctgtgac
tgtcactatgagaactacagggctcattgtatacacaccatgaccagtaaaatgaataca
gataatcgtgtggagagcccgattcccatcctacccttgtccaccccagacgtggagaca
gagaaactcatcaagatgaaggacgaggagttgaggaggatgcaggagatgcttcagaag
atgcagcagcagatgcagcatgagcaagacctgtga
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integrated database retrieval system
