KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112220246
Entry
112220246         CDS       T05605                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137  Mitophagy - animal
otw04140  Autophagy - animal
otw04144  Endocytosis
otw04145  Phagosome
otw04148  Efferocytosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112220246
   04145 Phagosome
    112220246
   04140 Autophagy - animal
    112220246
   04137 Mitophagy - animal
    112220246
   04148 Efferocytosis
    112220246
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112220246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112220246
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112220246
   04031 GTP-binding proteins [BR:otw04031]
    112220246
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    112220246
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112220246
  Exosomal proteins of other body fluids (saliva and urine)
   112220246
  Exosomal proteins of colorectal cancer cells
   112220246
  Exosomal proteins of bladder cancer cells
   112220246
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    112220246
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase Gtr1_RagA cobW ATP_bind_1 nSTAND3 PduV-EutP AAA_16 NTPase_1 Septin AAA_22 AAA_24 AAA_7 DUF5992 AAA_5 ATPase_2 SRPRB NACHT ABC_tran NB-ARC
Other DBs
NCBI-GeneID: 112220246
NCBI-ProteinID: XP_024237748
LinkDB
Position
LG20:complement(29610191..29614625)
AA seq 205 aa
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPF
VVLGNKIDLENRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV
ETYDFPDQIKLRDDRSSSSSDGCSC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcctcccgtaagaaggtgctgctgaaggtgatcatcctcggagactctggggtaggg
aagacatctctgatgaaccagtatgtaaataagaggttcagtaaccaatacaaggccact
ataggagctgacttcctcaccaaggaggtgatggtggatgacaggctggtcaccatgcag
atctgggacacggctgggcaggagcggtttcaatctctgggtgtggcgttctaccgtggg
gctgactgctgtgtgctggtctatgatgtcacggcgcccaacacctttaagactctggac
agttggagggatgagttcctgatccaggccagccccagagacccagataacttccccttt
gtggtgctaggcaacaagattgacctcgagaacagacaggtgacaacaaagcgtgcccag
gcctggtgtgccagtaagaacaacatcccctactttgagaccagtgccaaggaggccatc
aacgtagaccaagcattccagaccatcgcccgcaacgccctcaaacaggagtctgaggtg
gagacgtatgactttccagaccagatcaaactgagagacgaccggtcctcctcctccagc
gacggctgctcctgctga

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