Oncorhynchus tshawytscha (Chinook salmon): 112220272
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Entry
112220272 CDS
T05605
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1
KO
K12397
AP-3 complex subunit beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112220272 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220272 (ap3b1a)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
AP-3 complex
112220272 (ap3b1a)
Endosome - Golgi transport
112220272 (ap3b1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
112220272
NCBI-ProteinID:
XP_042158380
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All DBs
Position
LG20:complement(28387723..28474011)
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AA seq
1129 aa
AA seq
DB search
MNGHRGFSVLRSEAAGAVRTALVSAENLQLTLKTELSQEEQHLTPHTHTNGGPDETHTKG
YCTEVNEDLKEMLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELKKLV
YVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEA
ASDMSPYVRKTSAHAIQKLYSLDQDQKELLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDR
IDLIHKNYRKLCNLLVDVEEWGQVVIISMLTRYARTQFTSPWKEDGVFDEHNERAFYESD
EEKTRDETEAKPYMMDPDHRLLLRNTKPLLQSRNTAVVMSVAQLYWHLAPKNEVSIVTKS
LVRLLRSHREVQYIVLQNIATMSIQRKGMFEPYMKSFYVRSTDATHIKSLKLEILTSLAN
EANISTILREFQTYVKSQDKQFAAGTIQAIGRCATNISEVTDTCLNGLVLLLSNRDETVV
AESVVVIRKLLQIQPTQHSDIIKHMAKLFDNITVPMARASILWLMGEYCERVPKIAPDVL
RKMAKSFTSEEDIVKLQIVNLAAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIR
QLIVPNDKNGALSKYAHRILLAPKPAPVLESAYKDRDRYQLGTLSHTINTKASGYLELSD
WPAVAPDQSVRNVEVIEPVKEWAPSLGKTGKSKPAKSSDDKFYSDSGEEEEEEEKGSGSS
SSEDGSSSSSSSEESGSDAESHVQKNSSQSSEESDKSSSQSEKSSSESDSEKKERKTKTP
LQKKTVKPTAKDGDSDENGNVAKEANSSSAGESSSDSESDSDTHTDSDSGTEHKKKTKSK
AKPKVEVKSKKEVSLLDLGDFTPAPVTQHKSSVLSPSLLGDLEGLSLSNVSSTIQLSGPA
FVPEKSHDLLHRMTGKGLSAQYQFPRQPCLYQPTMVSVQISLTNTTDHPLEQIHIGDRSP
TGLNIHCFNTIECLEPEASVTVFIGIDFNDSTQAANFQLCTKEDHFSVSIQPAIGELLLP
ITMTELDFRKESGKLLGMNESSATITMAAENMTSQPISRPVATVANLGMVPSSQDNVHRF
AGKTASSGAVVLVTVELRESSTALITINTEKSVMGSMLLRDLKLALAQT
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcaccgaggtttctctgtgctgcgttctgaggcagcaggggctgtgaggaca
gctctggtgtctgctgagaacctccagctcaccttaaagactgaactcagccaggaggag
cagcacctcacaccccacacacacaccaatggaggccccgatgagacacacaccaaaggg
tactgtacagaagtgaatgaagaccttaaagagatgcttgagagcaacaaggagtcgctt
aaactggaggccatgaagagggttgttgggctgatcgcaaaggggaagaatgcctctgag
ctgttcccagcagtggtgaagaacgtggctagtaagaatatagagctgaagaagttggtg
tatgtgtacctggtgaggtatgcagaggagcagcaggacctggctctactgtccatcagc
acctttcagagggccctcaaggaccctaaccagctgatcagagccagtgctctcagggtt
ctgtccagtatcagagtcccaatcatcgttcccatcatgatgctggccatcaaggaggct
gcctccgacatgtccccttacgtcaggaaaacatccgcccacgccatccagaaactctac
agcctggaccaggatcagaaggagctcctgatagaagtaattgagaaactgctgaaggac
aaaagcacattggtagcaggcagcgttgtgatggcctttgaggaggtgtgtccggaccgt
attgacctgatccataagaactaccgtaaactctgtaacctgctagtggacgtggaggag
tggggccaggtggtcatcatctccatgttgacacgctacgccaggacacagttcaccagc
ccctggaaagaggacggtgtgtttgatgagcacaatgagagggcgttctatgagtctgat
gaggaaaagactagagatgagactgaggccaagccctacatgatggaccctgaccacaga
ctgctgctcaggaacaccaagcctctactacagagcagaaacactgccgtggtgatgtct
gtagcccagctgtactggcacctggctcctaaaaacgaggtcagcatcgtcaccaaatct
ctggtcagactgctcagaagccacagagaggtgcaatacattgtgttacagaacatagcc
accatgtccatccagagaaagggcatgtttgaaccttacatgaagagtttttatgtgaga
tccacagatgccactcacatcaaatcactcaagctggagatcttgaccagcctggccaac
gaagccaacatctccaccatccttagagagttccagacctatgtgaagagccaggacaag
cagtttgctgccggtaccatccaggccataggcaggtgtgccaccaacatctctgaggtc
acagacacctgcctcaatggactggtgctgctgctctccaacagagacgagacggtggtc
gcggagagtgtggtggtgatcaggaagctgctccagatccagcccacccagcacagtgat
atcatcaaacacatggccaaactctttgacaacatcactgtgccgatggcgcgggccagc
atcctgtggctaatgggagagtattgtgagagggtccctaagatcgcccctgacgtcctc
cgcaagatggccaagagcttcacctccgaggaggacatcgtcaagctccagattgtcaac
ctggctgccaaactctacctcaccaactccaaacagactaagctgttgacccagtacatt
ctgaacctggggaaatatgaccagaactatgacatcagagaccgcacgcgattcatccgc
cagctcattgtgcccaatgacaagaacggagcgctcagcaagtacgcccaccgcattctg
ctggcgcccaaaccagcacctgtcctcgagtctgcctacaaagaccgcgatcgttaccag
ttgggaaccctgtcccacaccatcaacaccaaagccagtggctacctggagctctctgat
tggcccgccgtggctcctgaccaatcagtgaggaatgtggaggtgattgagccggtgaag
gagtgggctccatctctagggaagactgggaaatccaagcctgccaagtcatcagatgac
aagttctactctgactctggagaggaggaggaggaggaggagaagggatcagggagcagt
agcagtgaggatggcagtagtagtagtagtagtagtgaagagtcaggcagcgatgcagag
agccatgtccagaagaacagcagtcagagcagtgaggagtcagacaagtcctccagccaa
tcagagaagagttccagtgaatctgactctgaaaagaaggagaggaaaactaagacccca
ctacagaagaagacagtcaaaccaaccgccaaagacggtgattcggatgagaatgggaac
gttgctaaagaagccaacagttcgtctgcaggagagagctcctctgactcagaatcagac
tctgacacccacacagactctgactcaggcaccgaacacaagaagaagaccaagtctaaa
gccaaacccaaggtggaggtgaagtcaaagaaggaggtgtctctgttggatctgggtgac
ttcactcctgcaccagtgacccagcacaagtcttctgtcctctctcctagccttctagga
gacctggagggcctgtcactctccaatgtctcctccaccatccagttgagcggtccagcg
tttgtcccagagaagagccatgacctgctgcaccgtatgacaggtaaaggtctgtcagcc
cagtaccagttccccagacagccctgtctctaccagcccaccatggtctcagtccagatc
agcctgaccaacaccacagaccaccctctggaacagatccacattggagacaggagcccc
acaggactcaacatacactgcttcaatactatagagtgtctggagccagaggcctcagtg
actgttttcatcggcatcgacttcaacgactcaacacaagcagccaacttccagctgtgt
acgaaggaggaccatttcagtgtgtccatccagcctgccataggggaactcctcctgccc
atcaccatgaccgaactggacttccgcaaggaatcaggtaaacttctgggcatgaatgag
agctcggcaaccatcaccatggcagcagagaacatgaccagccaaccaatcagcagacca
gtggcaaccgtggccaacctgggaatggttccatccagtcaagacaacgtccacaggttt
gctggtaagacggccagtagtggagctgtggtgctggtgacggtggagctgagggagtcg
tctacagccctgatcaccatcaacacagagaagagtgtcatgggctccatgctgctccga
gaccttaaactggccctggcccagacctag
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