Oncorhynchus tshawytscha (Chinook salmon): 112220273
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Entry
112220273 CDS
T05605
Symbol
jmy
Name
(RefSeq) junction-mediating and -regulatory protein
KO
K24045
junction-mediating and -regulatory protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220273 (jmy)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112220273 (jmy)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
DHO_dh
Motif
Other DBs
NCBI-GeneID:
112220273
NCBI-ProteinID:
XP_024237803
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Position
LG20:28722421..28776712
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AA seq
917 aa
AA seq
DB search
MSFMMEDSVESDWVAVRPNVFDEKERHKFIFIVAWNEIEGKFAITCHNRTVQKRTAFRDS
LLETVECDLVSPVTVKLAPEADKHKTPIKSPTKRKDDISTLVKVRCNVSPKEIKTTKSPI
RERTATVGSSSRPAESVIKTLGSWDIVSCKVTDIEVLEPADVPSLPRSPDDGDGEESDSS
REGYSWAGLFSFQDVRAAHVQLCAVNSDLEPCLPPFPEEPVGMWTVLFGAPEVSQRETDA
LCYQLQVYLGHALDTCGWKILAQVLFTESDDSEEYYESLSELRQKGYEDALQRAKKRLQE
LLERHRAMESMVELLQVYPEEDEAYGELLEATTQLYHYLLQPFRDMRELAMLRRQQIKIS
LETERLGPRRVEGLRREDEEWTRKAHAAVLSIQDLTVKFFETTARAQKAVYERMRVDQRK
FGKSTWAAAVDRVERLQYAVSKETLQLMRAKEICLEQRKHGLKEEMQSLQEGEDAMQRLD
QMEALYYELQLQLYDIQAEVLRCEELLLNAQLTSLRRQITERQDEVVYYDAYESPDAMRR
VEDPSAPLPPLRDKLSQLQQRTRQLEARRGRITAKKAYLKTKKEICIINHNQKIQQRQGM
KDDQTHQALQQRGEEQEEEEERSNARMSLDRSRTLDRLRSFKQRFPGQVTLKSSRLRMSH
GHSRRKTSTPLSPAGRPETLAASVQTDTVDLPELFAPPSDACGHQSVSLPPPGGATGPLS
ALSLPPLSAIPSSAPPPPPPPPPPPPPSLDDLSSEGVEWAHPTSPVRQSKAGSDSEPLPL
ASFSPRFFDSSQLQTARKKLKKTAMLDSSQWRRASSPMDEVLNSLKRGSFRLRKAELRVL
APDPDDDESNNILAQIRQGVRLKKVRTRPEQRHTKGLFPHSADALTRSIHEALRRIKEAS
PESESEDEGLPCTDWEN
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcatgatggaggattctgtagagtcggactgggtggccgttcgaccaaatgtt
ttcgacgaaaaggaaagacacaaattcattttcatcgtcgcttggaacgagatcgaggga
aagttcgccataacctgccacaatagaacagtacagaaacggacagcgtttcgggattcg
ctattggaaactgtcgaatgcgacctcgtatcccccgtcaccgtcaaactagcccccgag
gcagacaaacacaaaactccaataaaaagtcctaccaaaaggaaagatgacatctccaca
ttggttaaagttagatgtaacgtcagcccgaaagaaataaaaacgacaaagagccccatt
cgagagagaactgcgacggtgggttcctcgtcaaggccagccgagagtgttatcaaaaca
ctggggtcgtgggacatcgtgtcctgcaaggtgaccgacattgaggtcctggaaccagcg
gatgtccctagtttgcctcgctccccggatgatggcgacggagaggagtcggacagcagc
cgagagggctacagctgggccgggctattctccttccaggacgtccgggcagcccacgtt
caactctgcgcggtcaactcggacctggagccctgtctgccccccttccccgaggagccg
gtgggcatgtggacggtgcttttcggggccccggaggtgtcccaacgggaaacggatgct
ctgtgttaccaactccaggtgtacctgggccatgctctagacacctgtggctggaagatc
cttgcccaggtgctttttacagagagtgatgactcagaagagtactatgagagtttgagt
gagctgagacagaagggttatgaggatgctctccagagggccaagaaacgtctccaagag
ctgctggagaggcaccgggccatggagagtatggtggagctgctgcaggtgtatccagag
gaggatgaggcctatggagagttactggaggctacaacacaactctaccactacctgcta
cagcccttcagagacatgagagagctggccatgctgcgcagacagcagatcaagatctcc
ttggagacggagcgtctggggcctcgtcgtgtggaggggctgaggagggaggatgaggag
tggacgaggaaggctcacgctgccgtcctctccatacaggaccttaccgtcaagttcttt
gagaccaccgccagggctcagaaagcggtgtatgagcggatgcgtgtggaccagaggaag
tttggcaagtcgacgtgggctgcagctgtagaccgcgtggagcgtctgcagtacgctgtc
tccaaggaaacgctgcagttgatgagggccaaggagatctgcctggagcagagaaaacac
ggcctgaaagaggagatgcagagcctgcaggagggagaggatgccatgcagcggttggac
cagatggaggcgctgtactatgagctccagctgcagctctatgacatccaggctgaggtg
ctgcgctgtgaggaactgctgctcaatgcccagctcaccagcctccgcagacagatcact
gagcggcaggacgaggtagtgtactatgatgcgtatgagagtcctgatgccatgcggagg
gtagaggacccctcggcgcctcttccccccctcagagacaagctcagccagctgcagcag
aggaccagacagctagaggcacgcaggggacgcatcaccgccaagaaggcctaccttaaa
accaaaaaggagatctgtatcatcaaccacaaccagaagatacagcaacgccaaggtatg
aaggatgaccaaacccatcaagcactgcaacagcgaggggaggagcaggaggaagaggag
gagaggagtaacgccagaatgagtctggataggtcgagaactctggacagactacgcagc
ttcaaacagcgtttccctggtcaggtgactctgaagtccagcagactgcgtatgtcccac
ggccactcccggaggaaaacctccactcccctctcccccgcggggaggccggagaccctg
gctgccagtgtgcaaacagacactgttgacctccctgagctctttgctcctccctctgat
gcctgtggtcatcagagtgtctctctacccccgccagggggtgccactgggcctctctct
gccctttctcttcctcccctctcagcgattccctcctctgcccctccacctcctccccct
cctcctcccccaccccctccctccttagatgacctctccagtgagggagttgagtgggct
catcccactagcccagtccggcaatccaaggctgggtcagattcagagcctctccccctg
gcttccttctccccacgtttctttgacagcagtcagctgcagacagccagaaagaaactg
aagaagacagccatgctggactcctcacaatggaggagagcgagttctcccatggacgag
gtcctgaactctctgaagagaggcagcttccgcctgcgtaaggctgagctgagagtccta
gcccccgacccagacgatgacgagagcaacaacatcctggcacagatccggcagggtgtc
cggttgaagaaggtgcgaacgcggccggaacagcggcacaccaagggcttgttcccccac
tctgccgacgctctgacccgctccatccatgaagccctgagacgcatcaaggaggcttcg
cctgagtctgagtctgaggacgaaggcctgccctgcaccgactgggagaactag
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