Oncorhynchus tshawytscha (Chinook salmon): 112220280
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Entry
112220280 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: homer protein homolog 1
KO
K15010
homer
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112220280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112220280
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112220280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
GAS
DUF4407
DAHL
BLOC1_2
DUF1664
CCDC-167
DASH_Duo1
Ribosomal_L5
CALCOCO1
DUF4763
Crescentin
ATG16
MAD
Phage_GP20
DUF3461
Motif
Other DBs
NCBI-GeneID:
112220280
NCBI-ProteinID:
XP_024237817
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All DBs
Position
LG20:complement(28776982..28814409)
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AA seq
360 aa
AA seq
DB search
MGEQPIFSTRAHVFQIDPTTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINST
ITPNMTFTKTSQKFGQWADSRANTVYGLGFSSENHLLKFAEKFAEFKEAARLAKEKSQEK
MELTSTPSQESAIGDLQSPLTPESINGTDDERGTTPEMPQHPPEPRPEPSQNQLPFSHSS
SSINKHWEAELAALKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECVS
GQTPVIKSQKTELNQTIEELESALKAKEEELERLKEEVESANEFQTQKESLTHKLQETEE
RNQTLEAQLXELELHLEGSQLESEAFRKSLRSLLELLDGKIFELTELRDSLARLIEDSSS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcagcctatcttcagtacgagggcacatgtcttccagatcgaccccaccacc
aagaagaactgggtccccaccagtaaacacgccgtcacagtctcctacttctacgacagc
acgcgcaacgtctaccgcatcatcagtctggacggctctaaggcaatcatcaacagcacc
atcacccccaacatgaccttcaccaagacctcccagaagtttggccagtgggccgacagc
cgagccaacaccgtctatggcctgggcttctcctcagagaaccacctgctcaagtttgca
gagaaatttgcagagtttaaagaggcggcccgattagccaaggagaaatcccaggagaag
atggaactcaccagcaccccctctcaggagtcggccatcggtgacctgcagtcacctttg
accccggagagcatcaacggcactgatgacgagaggggtaccacccctgaaatgccgcag
cacccacctgagccccgtcccgagccgtctcagaaccagctgcccttctcccacagttcg
tccagtattaacaagcactgggaggccgagctggcagccctgaagggcaacaatgccaag
ctgacagcagctctgctggagtccacagccaacgtcaaacagtggaaacaacaactggct
gcttaccaggaggaggctgagagactacacaaacgggtgacagagctggagtgtgttagt
ggtcagacgccagtcatcaaatcccagaagactgagctcaaccagacgatagaagaactg
gagtcagcattaaaagccaaggaggaggaactagagaggttgaaagaggaagtggagagt
gctaatgagttccagactcagaaggaatcgctaacacataaactacaggagactgaggag
aggaaccagacgttggaggcccagctgngggagttggagctgcatctggagggcagtcag
ctagagagcgaggccttcaggaagagtctgcggtccctgctggagctgctggacgggaag
atctttgagctgacagagctccgagacagcctagccagactcatcgaggacagcagcagc
tag
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integrated database retrieval system
