Oncorhynchus tshawytscha (Chinook salmon): 112220311
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Entry
112220311 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112220311
KO
K06088
occludin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03272
Virion - Hepatitis viruses
otw04514
Cell adhesion molecules
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
112220311
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112220311
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112220311
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112220311
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112220311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
DUF6594
YldA
PDC10_C
Motif
Other DBs
NCBI-GeneID:
112220311
NCBI-ProteinID:
XP_024237859
LinkDB
All DBs
Position
LG20:complement(27678746..27700840)
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AA seq
1129 aa
AA seq
DB search
MTSGGGPCGRTERVRHEPHYDQVPPGSLRRNDPFDLQPLRYQRSTELALSSDPLPPPPLP
DQPPVGPEYDPSVSEDNPDPDPDPHLELDPALDIKPVHRFIPDSWKSFFRGTSLRSSKPC
PMPASSSSSNNNNSTSGGVRCSPPHSPSLPRSYRDPYGGSGGSSYNSRKELLGVGDHQES
ISGRTLHTALTYSERVEEYHERYGYMKSWAGLLRILGCVELLLGAAVFACVCAYVHKDNE
WFNMFGYSSPGSAYGGYGGGMYGAGTGGSYYSGPQTPFVLVVAGLAWIVTVILLVIGMTM
YYRTILLDSSWWPLTEFTINLAMAVLYMAAAVVYVRDTTRGGLCSLPIFNNGINGAFCRT
EAGQTAAIIFLFVTMVIYLIGAIVCLKLWRHEQARMYREKYGLEMHTTDFPAVRSLMPVP
EPIQGSTVVPIQAAVPKAGPPKVLQGAIPSGHIPKPVIMPDYIAKYPTIRTVDERDQYRA
VFNDQYSEYKELHADVQATTRKFDELDAMMRALPQHPNSQMEYDRVNKILQEYQRKKNDP
TFQEKRERCEYLKNKLAHIKQKIHEYDKVMEWNDGYGAGHILTTPHLNKVWPVIENRTEF
HQKPLVSDALTIFQQSFKERETLRAPVDSGMSSKHNGSPPPYESDGYHEPPQPAYSYYPD
DEFQHFYKWTSPPGIIKLMAIIVIVLCVAIFACVASTLAWDSQGAMSGFGGYGGSSYGGS
SYGGGGYSGSFGGAAYGAGNNYGYGGLGGNYNDPRTGKGFIIAMAAFSFITALVIFIIVV
SRHGLSESRRFYLAVVIICAILALLMLIATIVYLVAVNPMAQSTGSIYGNQLAGLCAQYQ
VPQVSGMLVNQYLYHYCVVEPQEAIAIVFGFLVMAALIIMMVFALKTRQKIRNYGKSNVL
WRKVKIINEEAPPQDVEAWVNNVSGFPDEGVVLTDYPEKFGGSRSHLDDTSTNYDKPPYN
DSPAPPVVCDFPVHSSAPYSSGSEMASSAAGKPKKRRAGRPRRTDGQDTDYASSGDELDD
DNDFDSEFPTIANEQERVDYKREFDRDHQEYKDLQGELDIINKSLSEVDRELDELQEGSP
QFLDAMEKYNRLKDIKKSADYQLKKRRSKYLKAKLSHIKRMVADYDRRA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgacctctggaggaggtccctgcggccgcactgagcgtgtccgtcatgaaccccattac
gaccaggtcccgccaggctccctacgccgaaacgacccctttgaccttcaacccctgagg
taccagcggagcaccgaactagccctgagctctgatccccttccgccccctcccctgccc
gaccagccccctgtggggcccgagtatgaccccagcgtcagtgaggacaacccagaccct
gacccagatccacacctcgaactagaccctgcactcgacatcaaaccggtccaccgtttc
atccctgactcgtggaagagcttcttccgagggaccagtctccgcagcagcaagccctgc
cccatgcctgcctcctcctcctcctctaacaacaacaacagcaccagtggcggggtgcgc
tgctcgcccccacactcgccctccctgcccagatcctaccgggacccctatggggggtcg
gggggaagcagctacaactcccgcaaggagctcctgggagtgggtgaccaccaagagtca
atttcgggacgcacactccacacggcgctcacctacagcgagcgggtggaagagtaccac
gagcgctacggctacatgaagtcctgggcgggcctgctgaggattctgggatgcgtggag
ctgctgctgggtgcagcggtgttcgcctgcgtgtgcgcgtacgtgcacaaggacaacgag
tggttcaacatgtttggctactcctcgcctggaagtgcatacggaggctacggaggtggg
atgtacggagcgggcaccggagggtcctactactcgggtcctcagactccgtttgtgtta
gttgtggcggggctggcctggatcgtgactgtgatattgttggtgatagggatgactatg
tactaccgcaccatcctactggattcctcctggtggcccctgacagagtttactataaac
ctggccatggccgtgctctacatggctgcagctgtagtctacgtcagggacaccacgcgg
ggcggtctctgctcccttcccatcttcaacaatggcatcaacggggctttttgccgcacc
gaggccgggcagacagccgccatcatctttctgttcgtcaccatggtgatctacctgatc
ggggccattgtgtgtctgaagttgtggcggcacgagcaggcacgcatgtaccgggaaaag
tatggcctggagatgcatacgacagatttccctgcggtgcggtctttgatgccggttcca
gagccaattcaggggtctactgtggttcccatccaggctgcggtacccaaggcagggcca
ccgaaggttctacagggagctatcccttctggtcacatccccaaaccagtcatcatgcct
gactatatagctaagtacccaaccatccgtacggtcgatgagcgggaccagtaccgggct
gtgttcaatgaccagtactctgagtacaaggagctccacgccgacgtgcaggccaccacc
aggaagtttgacgagctggacgccatgatgcgtgccctaccccagcaccccaacagtcag
atggagtatgaccgcgtgaacaaaatccttcaggagtaccagaggaagaaaaatgatcct
acgttccaggagaagagggagcgctgtgaatacctgaagaacaaactggcccacattaaa
cagaagatccacgagtacgacaaggtcatggagtggaacgatggctacggggcgggtcat
attttgacgacgccacacctgaacaaggtgtggcctgttattgagaatcggacggaattt
caccagaaaccactggtgtcagacgcgctgactattttccaacagagctttaaagagaga
gagacccttcgggcacctgtggattcaggaatgtcttccaaacacaacgggagtccgcct
ccctatgagtcagatggatatcatgagccaccccagccggcgtactcctactaccctgac
gatgagttccagcacttctacaaatggacgtctcccccgggcatcatcaagctgatggcc
atcatcgtcattgtcctctgtgtggccatatttgcctgtgtggcctctacgctggcctgg
gacagccagggggccatgtctggcttcggtggttacgggggcagctcgtatgggggcagc
tcgtacggaggcggtggttactccggtagctttggtggtgctgcctatggtgccggtaac
aactatggctacggcggactcggagggaactacaatgaccctcgcactggcaaaggattc
atcattgccatggcagcattcagcttcatcacggcccttgtcattttcatcatcgtggtg
tcgaggcatggcctgtcggagtctagaaggttctacctagctgtggtgatcatctgtgct
atcctggccctgctgatgctcatagcgactatagtgtacctggtggcggtgaaccccatg
gctcaatctacagggtcgatctatgggaaccagctggcaggcctgtgtgcccagtaccag
gtcccccaggtttcaggaatgttggtcaaccagtatctctaccattactgtgtggtggag
cctcaggaggccatagcgatagtgtttggcttcctggtgatggcggctctgatcatcatg
atggtgtttgccttaaagacgcgccagaaaatcaggaattatggcaagtccaacgtcctg
tggaggaaggtgaagatcatcaacgaggaggccccgccccaggacgtggaggcatgggtg
aacaatgtgtcaggttttcctgatgaaggtgtggtgctgaccgactacccagagaagttt
ggaggatccaggagtcacctggacgacaccagcaccaactacgacaaacctccctacaat
gacagcccagctcctccagtagtttgtgacttccctgtgcacagtagcgccccctacagc
agtggctcagagatggccagctcagcagcagggaagcccaagaagagacgggccggtcgt
cctcgccgtactgatggacaggatacagactacgcttcctctggggacgagctggacgac
gacaatgacttcgacagtgagttccccaccattgccaatgagcaggaacgtgtggactac
aagcgtgagtttgaccgggatcaccaggagtacaaggacctgcagggagagctggacatc
atcaacaagagcctgtcagaggtggacagagagctggatgagctgcaggagggaagcccc
cagttcctggatgctatggaaaagtacaacaggctaaaggacataaagaagtcagcagat
taccagttgaagaagcgcaggagtaaatacctgaaggccaaactgtcccacatcaagagg
atggtcgctgactacgatcgcagggcctga
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