Oncorhynchus tshawytscha (Chinook salmon): 112220396
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Entry
112220396 CDS
T05605
Name
(RefSeq) ephrin-A5 isoform X1
KO
K05462
ephrin-A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112220396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112220396
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112220396
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112220396
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112220396
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Axon guidance molecules
112220396
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112220396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
112220396
NCBI-ProteinID:
XP_024238041
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All DBs
Position
LG20:22876455..22938106
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AA seq
225 aa
AA seq
DB search
MILFVSLVLWMCAYGQEPASKVVSDRYAVYWNRTNPRFYRGDYHIDVCINDYLDVFCPHY
LDYVPEERMERYVLYMVNYDGYSSCDHTAKGFKRWECNRPHSPNGPLKFSEKFQLFTPFS
LGFEFRSGREYYYISSTVADNGRRSCLRLKVFVRPATDNCVKTVSVHDRVFDVNERVDNS
LEPRDDTSHESAEPSRGDVNSVGRVQTTGLLVTSALVLCAAILSL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgttcgtttccctggtgttatggatgtgtgcatatggccaagagcctgcgtcc
aaggtggtgtctgaccgctatgccgtctactggaaccggaccaaccccaggttctaccgg
ggtgactaccacatcgacgtgtgtataaatgactacctggacgtcttctgtccccactac
ctggactatgtccctgaagagcggatggagcgctatgtcctctacatggtcaactacgac
ggctacagctcctgtgaccacaccgccaagggcttcaaacgctgggagtgtaacaggccc
cactcccccaacggacccctgaagttctcagagaagttccagctcttcacccccttctct
ttgggcttcgagttccgctccggcagagagtactactacatctcatccaccgttgctgac
aatggaaggagaagttgccttcgactgaaggtgttcgtcagaccagcaacagacaattgt
gtgaaaactgtcagtgttcacgatcgggtctttgacgtcaatgagagggtggacaattcc
ctagaaccaagagatgataccagtcacgaatcagccgagccgtcccgaggtgacgtcaac
tcggtgggccgggttcagaccactggcctgctggtcacctccgccctggttctctgtgca
gccatcttgtctttatag
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