Oncorhynchus tshawytscha (Chinook salmon): 112220462
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Entry
112220462 CDS
T05605
Name
(RefSeq) AF4/FMR2 family member 2-like
KO
K15194
AF4/FMR2 family member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112220462
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112220462
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Ortholog
Paralog
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
112220462
NCBI-ProteinID:
XP_042158772
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All DBs
Position
LG21:1919708..2102085
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AA seq
1320 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRSALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTN
KGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPGPSFFTEGAQRTSNRT
GTGHNTTSMPPPPSSSSLTSSTRLSGHQSSKKSRSSDWLQGAHCSSSTSTQEVGGQVVGV
PTSSRGKHLSTHEQQQQQPQRHEELFSSQGDVVGHKGDSSSSPNSSTSRRHGAGQQQAPS
AAEHGGYKDSNNHVKSPLEQEPGSHGSSSPVASTSLLPSGLSTPTFPQGLHVKPSAVQQQ
KPTAYVRPMDGQDQVPLDSPELKPPLEVGDVGYSNLAFGSTTTSSKSKLPKLTLTQTGEV
SLSSDSSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFPIPSKESQHLPSGYAGQKRCNV
PGNKPATKSVPQKSMLEDDLKISSDEEDTDQQAAEKPKPRSTPLSIPVATSRTTDPGLSS
GASGSSSESESSSESDSDSESSSSDSECNGASRTATPEPEPPSTNKWQLDKWLNKVTPHN
KALINTQPERESHGLSSSQTDHNQQAPEGQGPAPGKSKPGPAALLAPTDPKERALLSPIR
EKAKPKTGPKVSEGKGSKVKSPAVVAVEPAPARRSLGKKQPKKVERSSSLEEHTSWSKPI
NPTISTTSKEKDPPSLLEQPKSRTKSTSGKTAPRKEPRTTTTITPAPPPLAPVLEKKKHR
GPSKIIPKSKEFIETESSSSECHSEPEELVKIHNPPCPGPSSLQTLKAAKDCNSNILTVS
SLTSTCSSSISIPDPGAMDLLGDPLFSSVPIVQNKLLSPLRDFEDIKSLWVKIELSFLSK
IPGQDPPEPPSVKVEPREPLEPSIKHRRQSPASLQSTPVEKPPSKAKRKHKMDHCDAIGG
SKKLRLEKDSLLLPPCISPIHNHKNISTKDSLRKQPRKREEKRELLPPLLSPLSDEPPIR
QRRTSECSSFSQEGGASSATSTLLLPTLSCSLPNFSSSSSSSSHKHRSKGESKSFSRSKT
SSEEDTHSKPSGSFHGNGQSDSDVWSNPSSLSMDHMEPRRPKLTFNNTVHNADYCMQEAK
KLKHKADALMEKFGKAINYADGALSFIECGNAMERDPLEAKSPYTMYSETVELIRYAMRL
KNFTSHSATVAEKKLAVLCNRCLSLLYLRMFKLKKDHAVKYSRSLMEYFKKSSQAPSPWG
ANGKSTGTPSPLSLSPSPVSSVSSSTGPGLVGSCPSGASSNVAIPQRIHHMAASHVNITN
NILRSYEHWDTAEKLATESQEFFQELDSTMEPLSQHSSMTELVRYIRQGLHWLRIEAHML
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattac
gagcaggaccgcagtgcgctcaagaagagggagtgggagcggcggactcaggaggtgcaa
caggacgaagatctcttctcctccgggtttaatctattcggggagccgtacaagaccaac
aaaggtgatgccctggccaaccgggtacagaacactctggggaactacgatgagatgaag
gagctcctgaccagccactccaaccagagccacctggtggggatccctaagaactctgtt
ccccagactcctggccccagcttcttcaccgagggggcccagaggacaagcaacaggacg
ggcacagggcacaataccacctccatgccccctccgccctcctcttcatccctgaccagc
tccacccggctgagcggccatcagagctccaagaagtcccgctcctccgactggttgcag
ggagcccactgctccagcagcaccagcacccaagaggtgggggggcaggtagtgggggta
ccaaccagcagcagggggaaacacttgtctacccatgagcagcagcagcagcaaccccag
agacacgaggagctgttcagctcacagggcgacgtcgtgggccacaagggagactccagc
agcagccccaactcctccacctccaggaggcatggcgctgggcagcagcaggccccttcg
gcggctgagcatggcggatacaaggacagcaacaatcatgttaagtctcccttggagcag
gagccgggctcccacgggtccagttcccccgtggcctccacctccctgctgcccagcggc
ctttccacgccaaccttcccccagggcctgcacgtcaagcccagcgccgtgcagcagcag
aagcccacggcctacgttcggcccatggacggccaggaccaggtgcccctggattccccg
gagctcaaacctcctctggaagtgggggacgtgggctacagcaacctagcctttggcagc
accaccaccagctccaagagcaagctgcctaagctgaccctgacacagactggggaggtc
agcctgtccagtgactccagctgtgtggaggagattctacgggagatgacccactcctgg
cctccccccctgactgccatccacactccaggcaaagctgagcagaccaagttccctatt
ccctccaaggagtcacaacacttaccctcaggatacgctggacaaaagcggtgcaatgtt
cccggtaacaagcctgcaaccaagtctgtaccacagaagtcaatgcttgaggatgacctg
aagatcagcagtgacgaagaggacactgatcaacaggcagcagagaagcccaagcccaga
agtacacctctcagcatccctgtggccacgtctcggaccactgacccgggcctctccagc
ggtgcctcgggcagctccagcgaatcagagagcagctccgagtcagactccgatagcgag
agcagctccagtgacagcgagtgtaacggggcctcccggaccgccaccccagagcctgaa
cctccatcaacaaacaaatggcagctggataagtggctgaacaaagtgaccccacacaac
aaagcacttatcaatacccagccagagagagagagccatgggctcagcagctcccagact
gaccacaaccaacaggcccctgagggccagggcccggccccagggaagagcaagcctggc
cctgccgccctgctggccccgaccgaccccaaggaacgggccctcctcagccccatcaga
gagaaggccaagcctaagactggaccaaaagtctcagagggcaagggttcaaaggtcaaa
tccccagccgtggtggcggtggagccagccccagccaggcgcagcttggggaagaaacag
ccgaagaaagtggagcgctcgtccagcctggaggaacacacctcctggtccaagcccatc
aaccccaccatcagcactacttccaaggagaaggaccctccatccctcctggagcagccc
aagtccaggaccaagagcaccagtgggaagactgcccctaggaaggagcctcgcaccacc
actacaattactccagctcctcctcccctggccccagtcctggaaaagaagaagcacagg
gggcccagcaagatcatccccaagtccaaggagttcatcgagacggagtcttcgtcatct
gagtgccactctgaaccagaggagctggtcaagatccataaccctccctgtccaggaccc
agcagtctgcagactctcaaagcagccaaggactgcaacagcaatatcctgactgtcagt
agccttaccagcacctgcagctcttccatatccatcccagaccctggggccatggacctc
ctaggggaccccctcttttcctccgtccccatcgtccagaacaaactgctgtcccctctc
agggactttgaggacatcaagtcactgtgggtgaagattgagctgagcttcctgtctaag
attccagggcaggacccccctgagcccccttctgtgaaagttgagccccgggaaccactt
gaacccagcattaagcacagacgacagtcccccgccagtcttcagtctacccctgttgag
aaaccacctagcaaggccaagaggaaacacaagatggaccattgtgacgctatcggcgga
agcaagaagttacggttggagaaagactccttgcttcttcccccatgcatctcaccgata
cacaaccacaagaacattagcacaaaagactctctgaggaaacagcccaggaagagagag
gagaagcgagagctgctgcctcccctgctttctccgctctccgacgaaccccctatacgc
cagcgcaggaccagcgagtgttcctccttcagccaggagggcggtgctagcagcgccacc
agcaccttattgctacccacactcagctgctctctgcccaacttctcctcctcatcctcc
tcttcctcacacaagcaccgcagcaaaggagagagcaaatccttctcacgttccaagaca
agcagtgaggaagatacccatagcaagccgtctggcagtttccatggcaacggtcagtcc
gattctgacgtttggtccaacccgtcatctctgtccatggaccacatggagcctagaagg
cccaagctaacgttcaataacacagttcataacgcagactactgcatgcaagaagccaag
aaactaaagcacaaagcagatgcactgatggagaagtttggcaaagccattaactacgct
gatggggcgctgtcgttcatcgagtgtggtaacgccatggagcgggatccgctggaggcc
aagtctccatacactatgtactctgagacggttgaactcatcaggtatgccatgaggtta
aagaactttacaagtcactcagcaactgtagccgagaagaaattagctgtgttgtgcaat
cgctgtttatccctcctgtacttgagaatgttcaaactaaagaaggaccatgcagtaaag
tattcccgttccctaatggagtatttcaagaaaagttcccaagcaccttcgccatgggga
gccaatggaaagagcacaggcaccccatcacccctgtctctgagtccctccccagttagt
tcggtgagcagcagtacgggccctggccttgtgggctcctgtccctccggtgcctccagc
aacgtggccatcccccagcgcatccatcatatggccgctagccacgtcaacatcaccaac
aacatcctccgcagctacgagcactgggacacggcagagaagctcgccacagagagccaa
gagttctttcaggagctggactcgacgatggaaccattgagccaacacagcagcatgaca
gaactggtgcgctacatacgccaaggactgcactggctacggatagaggcccacatgtta
tag
DBGET
integrated database retrieval system
