Oncorhynchus tshawytscha (Chinook salmon): 112220574
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Entry
112220574 CDS
T05605
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112220574
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112220574
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
PH_14
Motif
Other DBs
NCBI-GeneID:
112220574
NCBI-ProteinID:
XP_042175301
UniProt:
A0A8C8ISF2
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MPKISTEQSYPSHGRCSVNTPDNLDQIESGSSHEDQLDPSFTGTGGMSRLSRFMVLVKGW
SSHSSQPSDALPLDSTMKSHTEFREAWRAESMSNTRLSDQVRRRNNGQWPLAAYNMNNCN
NKDDKKDEKKDEKKPDPPKPPDKKPDEKKPDPPKEVWIIDPATDMYYQWLTIVAVPAFYN
LMLLVPRASFNDLQANYVMLWMVLDYTSDVIYYIDTFVRSRTGFLEQGLLVKDPVKLKEH
YRAQKQFKYDIISMIPTDLAFIPYGYNNPEFRFNRLGKMARLFEFFDRTETRTNYPNIFR
IGNLVLYILIIIHWNACVFYALSKLLGFGSDTWVYPNITDPEMGQLSRKYVYCLYWSTLT
LTTIGETPPPVRDIEYLFVVADFLTGVLIFATIVGNVGAMISNMNAARAEFQAKIDSIKQ
YMEFRKVSKVLEARVVKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAINVHMETLRKVRI
FQDCEAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQWCVLS
DGAYFGDLSILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMDALTEYPDAKYALEEKG
KAILMKDNLIDEELGNKADPKEMENKVLTMETNMEVMTIKFTRMIAEWATYQAKVKQRIS
NMEARVKPLRQGDG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagatcagcacggagcagtcttatcccagccacggccgctgttcggtaaacacc
cccgacaacctggaccagattgagagtggcagcagccatgaggaccaactggacccctcc
ttcacggggacaggaggcatgtccaggctgtctcgcttcatggtgttggtgaagggctgg
tcatctcacagtagtcagccctcagatgcccttcctttagactcaaccatgaagtcacac
acagagttcagagaggcctggagggcagagagcatgtccaacaccagactctctgaccaa
gtccgcaggaggaacaatggtcaatggccccttgcagcatacaatatgaacaactgcaac
aacaaggatgacaaaaaagacgagaagaaggatgagaagaaaccggatcccccgaagcca
cctgataagaaaccggatgagaagaagcctgatccccctaaagaagtgtggatcattgac
cctgccacagatatgtactaccaatggctgacaatagtagctgtcccagcattctacaac
ttaatgcttctggtgccaagagctagtttcaatgacctgcaggccaactatgtaatgctg
tggatggttcttgactacacttcagatgtcatctattacattgacacgtttgtgagatct
aggacaggtttcctggaacaaggattgctcgtgaaggacccagtgaaactaaaagaacac
taccgagcccagaagcaatttaaatatgacatcatatcgatgatacctaccgatcttgcc
ttcattccatacggttacaacaatccagagttcagattcaaccgcctcggcaagatggcg
cgcctctttgagttcttcgaccgaacggaaaccaggacaaactaccccaacattttcaga
atcggcaaccttgtgctttacatcctgatcatcatccactggaacgcttgcgtcttctac
gccctctccaaactcctgggcttcggctcagacacctgggtgtacccaaacatcactgac
cccgagatgggccagctgtccaggaagtacgtctactgcctctactggtccaccctgacc
ctgaccaccattggagagaccccgccccctgtcagagacatcgagtacctgtttgtagtc
gccgacttcctcacgggcgtgctgatttttgccaccattgttggtaacgttggcgccatg
atctccaacatgaacgcggcacgcgccgagttccaggccaagatcgactccatcaagcag
tacatggagtttcgtaaggtctccaaggtcctggaggccagggtggtcaagtggtttgac
tacctgtggacggagaagaagacctgcgacgagaaggaggttctgaagaacctgccggac
aagctgaaggctgagattgccatcaacgtccacatggagacgctgaggaaagtgcgtatc
ttccaggattgcgaagccggcctgctgatcgagcttgtgctcaagctgcagccgcaggtc
ttcagccccggagactacatctgtaagaagggcgacattggccgagagatgtacatcatc
aaagaagggaagctggctgtggtggcggacgacggggtaacacagtggtgtgtgctgagc
gatggggcgtacttcggagatctcagtatcctgggcatcaagggcagtaaggctggcaac
agaagaacagccaacatcaggagcgtgggttactctgacctcttcgccctgtctaaagac
gacctgatggatgctctcactgagtaccctgacgccaagtacgctctggaagagaaaggc
aaggccatcttgatgaaagacaacctcattgatgaggaattgggaaacaaggccgacccc
aaagaaatggagaacaaagtccttacaatggagaccaacatggaggtcatgacgatcaag
ttcaccagaatgattgcagagtgggcaacataccaggccaaggtcaagcagcgcatcagc
aacatggaggccagggtcaaacccctcaggcagggggatggatga
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