Oncorhynchus tshawytscha (Chinook salmon): 112220581
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Entry
112220581 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112220581
04082 Neuroactive ligand signaling
112220581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112220581
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112220581
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
112220581
NCBI-ProteinID:
XP_042159355
UniProt:
A0A8C8F6L5
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Position
LG21:35806894..35835254
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AA seq
411 aa
AA seq
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MALLILTLVTLPCVGCVYGQESYAGENITRILDRLLDGYDNWLRPGSGGMVTEVKTDIFV
TSFGPVSDVEMEYTIDMFFRQTWVDERLKYDGAVEILSLNNKMVDKIWTPDTFFRNSRKS
IAHNMTTPNKLFRIMQNGTVLYTMRLTIVAECPMRLMDFPMDGHICPLRFGSYGYTNSEI
TFTWRKGLEASVDCPQESISLLQYDLVGQKLSTETFKSNTGDYSVMVVHFLLQRKLGYYL
IQTYIPLIMVVVLSQVAFWINKESVPARTVASITTVLTMTTLSISARQSLPKVAYATAMD
WFIAVCFAFVASALIEFAAVNYFATLEANRLKKKKNARQKKMEALAEASYDEEDDESASS
GSAVPPISAPAGTSPIDQYSRIMFPLAFALFNLFYWIIYLGKDTMEQARED
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttgattctgacattggtcactttgccctgtgttggctgtgtctatggacaa
gaaagctacgcaggtgaaaacatcacccgcattctggaccgactactagatggatatgac
aactggttgcgaccaggatccggaggtatggtcacagaggtgaaaacagatatctttgtc
accagctttggcccagtgtcagatgtggaaatggagtacaccatcgacatgttcttccga
cagacctgggtggacgagaggctgaagtacgacggcgccgtggagatcctgagtctcaac
aacaagatggtggataaaatctggacacccgacacgttcttcaggaactccaggaagtcc
atcgcccacaacatgaccactcccaacaagctgttccgcatcatgcagaacgggaccgtc
ctctataccatgagactaaccattgttgctgagtgtcccatgaggctcatggacttccct
atggacggacatatatgtcctctgcggttcggcagctatgggtacacgaacagtgagatc
acctttacctggaggaagggtctggaagcttctgtagactgtcctcaggagtctatcagt
ctgctacagtatgacctggtgggacagaagttatccacggagacattcaagtccaacaca
ggtgactactctgtcatggtagtccattttctactacagaggaagctaggctactacctg
attcagacgtacatccctctgattatggtggtggtgctgtcgcaagtagccttctggatc
aacaaagagtctgtccctgcacgcactgtggctagcatcaccacggtcctcaccatgaca
accctcagcatcagtgcccgccagtctctgcccaaggtggcctacgctacagccatggac
tggttcatcgccgtgtgttttgccttcgtggcgtctgcgctcatcgagttcgccgctgtc
aactactttgcgacgctggaggccaacagactgaagaagaagaagaacgccaggcagaaa
aaaatggaggccctggctgaagcaagttatgatgaggaggatgatgagagtgcatcatct
ggttcagctgtgccccccatctcagcgccggctggcaccagccccatagaccagtactcc
cgcatcatgttccccctggccttcgcactcttcaatctcttctactggatcatatacctg
ggcaaggacaccatggaacaggccagagaggattga
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