Oncorhynchus tshawytscha (Chinook salmon): 112220587
Help
Entry
112220587 CDS
T05605
Name
(RefSeq) glycine receptor subunit alphaZ1 isoform X1
KO
K05193
glycine receptor alpha-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112220587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220587
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112220587
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112220587
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glycine
112220587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112220587
NCBI-ProteinID:
XP_042159370
LinkDB
All DBs
Position
LG21:complement(36801034..36891131)
Genome browser
AA seq
484 aa
AA seq
DB search
MRPAKMFRINALGIYLWETIVFFSFLFGAISCLAASKESAARKAASPMPPSEFLDKLMGK
VSGYDARIRPNFKVAGVPPSGRDPQGPKTEASHKKGPPVNVTCNIFINSFGSIAETTMDY
RVNIFLRQQWNDPRLAYSEYPDDSLDLDPSMLDSIWKPDLFFANEKGANFHEVTTDNKLL
RISKNGNVLYSIRITLVLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWDEKGAVQV
ADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILS
WVSFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSAL
LEYAAVNFIARQHKELLRFRRRRRHMKEDEGGEGRFSFTAYGMGPACLQAKDGMAIKGNN
NNAPTATAGPQEKTVEEMRKLFIGRAKRIDTVSRVAFPLVFLIFNIFYWLVYKIIRSTDV
HQMT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggcaaaaatgttccgaataaacgctctcgggatctatttgtgggaaacaata
gtatttttcagctttctttttggagctataagttgcttggcagcctctaaagaatccgcg
gctcgaaaagctgcctccccgatgcctccctctgagttcctggacaaactcatgggtaaa
gtttcgggttacgatgcaagaatcagacctaatttcaaagttgcaggggtccccccgagt
ggaagagacccacaaggccccaaaacagaagcttctcacaagaaaggtccccctgtaaac
gtaacgtgcaacatttttattaacagttttgggtccatcgctgaaacaacaatggactac
agagtgaatatcttcctgaggcagcaatggaacgaccccaggctggcctatagtgaatac
cccgacgactctcttgacctggacccatctatgttggactctatctggaaacctgatttg
ttcttcgccaatgaaaaaggcgccaatttccatgaggttacgactgacaacaagctacta
aggatttcaaaaaatgggaacgtattgtatagtattcgaataacactggtcctggcctgt
cccatggacttgaagaacttcccaatggacgtacagacctgtatcatgcagctggagagt
ttcggctatacgatgaatgatctcatatttgagtgggatgagaagggagccgtgcaggtc
gcagacgggctgacgttacctcagtttatactgaaagaggagaaagacctgcgatactgt
accaagcactacaacacaggaaagttcacttgtattgaggctcgtttccatctggagagg
cagatgggctattacctgattcagatgtacatccccagccttctgattgtcattttgtcc
tgggtgtccttctggatcaacatggacgctgcacctgccagagtgggattgggcattacc
accgtgctcactatgaccacccagagctccggctcccgagcctccctccccaaggtgtcg
tatgtgaaagccattgacatctggatggccgtgtgcctcctgtttgtcttctcggccctg
cttgagtacgctgctgtgaacttcatcgctcggcaacacaaggaactgctgcgcttcagg
aggagaaggagacacatgaaggaggatgagggcggtgagggccggttcagcttcaccgcc
tatggcatgggcccagcctgcctgcaggccaaagacggcatggccatcaaagggaacaac
aacaacgccccgaccgccactgccggccctcaggagaaaacggtggaagagatgcgcaag
ctcttcatcggccgcgcgaagaggatcgacacggtctctcgcgtggctttcccgctagtc
ttcctcatttttaatattttctactggctcgtatacaagatcatccgaagcacggatgta
caccagatgacgtaa
DBGET
integrated database retrieval system
