Oncorhynchus tshawytscha (Chinook salmon): 112220619
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Entry
112220619 CDS
T05605
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9-II
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112220619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112220619
Ion channels [BR:
otw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
112220619
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112220619
NCBI-ProteinID:
XP_042158975
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Position
LG21:complement(8252200..8260802)
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AA seq
547 aa
AA seq
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MRKMVPVVCFATMLLQVAHSAQGRYAQQLLTDLMENYSNALRPVEDTDKALNVTLQITLS
QIKDMDERNQVLIAYLWIRQTWHDAYLRWNKEDYDGLEVIRIPSSLVWRPDLVLYNKADD
DFSGPLDTNVVLRYNGEITWDAPAITKSSCVVDVSYFPFDSQECNLTFGSWTYNGNQVDI
AMGMDSGDLSDFVENVEWECHGMPATKNVIMYGCCSDPYPDITYTVLLQRRSSFYIFNLL
LPCFLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSESVPLIGKYYIA
TMTMITASTALTIFIMNIHFCGAEAKPVPHWAKVLIIDYMSKIFFVYEVGENCATATSSS
SSSSHFGQDDVHQPNFSPHRQANGKPGGNSGRENQYRHKHPRPQTPGPQRHPKPRHQHHI
TRDEKNHLSSSKYEGFESNRNLPLGDCCKEAPPCCPEDEKTAVVAAAVASVTFGPCVFCS
HGSSLPGVDSKLVRNVEYIANCFREQRATCAKGAEWKRVAKVMDRFFMWIFFIMVFLMSI
LIIGKAP
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagatggttccagttgtgtgctttgcgacgatgttgctccaggtggctcactcg
gctcagggccggtacgctcaacagctgctcaccgacctgatggagaactactcaaacgcc
ctgcggccggtggaggacacagacaaagccttgaacgtaacactgcagatcactctctcc
cagatcaaagacatggatgagaggaaccaggtattgatagcgtacctgtggatccgtcag
acgtggcacgatgcctacctgaggtggaacaaggaggactacgatggcctggaggtcata
cggatccccagcagcctggtgtggaggcctgacctcgtcctctataacaaggcggatgat
gacttctcagggccgctagacacgaacgtggtgctgcgctataatggggagattacatgg
gatgctccggccatcaccaagagctcctgtgtggtggacgtgtcctacttccccttcgac
agccaggagtgcaacctcaccttcggctcctggacatacaacggcaaccaggttgacatc
gctatgggcatggacagcggggacctgtctgatttcgtggagaacgttgaatgggaatgc
cacggcatgccggccaccaagaacgtcattatgtacggctgctgctccgacccctaccct
gacatcacctacaccgtcctgctccagcgccgctcctccttctacatctttaaccttctc
ctgccttgcttcctcatctccttcctggctccgctgggcttctacctgccggctgactct
ggggagaaggtgtccctgggggtcactgtgctgctggccctgactgtcttccagctcatg
gtggccgagagtatgccgccgtctgagagtgtgccgcttattggaaagtactacatcgct
accatgacgatgatcacagcctccacggctctcaccatcttcatcatgaacatccacttc
tgtggggccgaggccaaacccgtcccccactgggccaaagtcctcatcatcgactacatg
tccaagatcttctttgtctacgaggtgggagagaactgtgccactgccacctcttcctcc
tcctcctcatcacattttggccaggacgatgtccaccaacccaacttcagcccccaccgc
caggccaatgggaagccggggggcaacagcgggcgagagaaccagtaccgccacaaacac
cccagaccccagactcctggacctcaacgtcaccccaagccccgacaccaacaccacatc
accagagacgagaagaaccatctctccagctccaaatacgagggctttgagtccaacagg
aacctccccctgggggactgctgcaaggaggctccgccctgctgtccggaggatgaaaag
acagccgtggtcgctgctgcggtggcctcagtaacctttggcccctgtgtgttctgtagt
cacggcagcagcttacccggggtggactccaagctggtgcggaacgtggagtacattgcc
aactgcttccgggagcagagggccacctgcgccaagggggcggagtggaagagggttgcc
aaggtgatggacaggttcttcatgtggatctttttcattatggtcttcctcatgagcatt
ctgatcatcggcaaggcaccatga
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