Oncorhynchus tshawytscha (Chinook salmon): 112220700
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Entry
112220700 CDS
T05605
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112220700
Enzymes [BR:
otw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
112220700
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
112220700
HDAC complexes
SMART complex
112220700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
112220700
NCBI-ProteinID:
XP_024238310
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All DBs
Position
LG21:complement(2853016..2861595)
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AA seq
428 aa
AA seq
DB search
MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHAPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatagaacagcatatttttatgatccggacgtggggaactttcattatggtgct
ggtcaccctatgaaaccccatcgtctctctctgacgcacagccttgttttgcactatggc
ctatacaaaaagatgcaggttttcaaaccatacaaagcctcccaacatgacatgtgccga
tttcactcagaagattacattgactttcttcagaaggtcagccccaacaatatgcagggc
ttcacaaagagtctcaacaccttcaatgtgggggatgactgccctgtattcccgggcctg
tttgagttctgctccaggtatactggagcgtcactacagggagcaacacagctaaaccac
aagatatgtgacattgccatcaactgggctgggggtcttcatcatgctaagaaatttgag
gcctctggattttgctatgtgaatgacattgtcatcagtatactggagcttttgaaatac
cacccacgtgtgctctacatagacattgacattcaccatggcgatggggtgcaggaagcc
ttttacctgactgatcgggtcatgactgtatccttccacaagtatgggaactactttttc
ccaggcacaggtgacatgtatgaggtgggggctgagagcggccgttactactgcctgaac
gtgccgctccgggatgggatcgatgaccagagctacaggcaactctttcagccagtcatt
aagcaagtggtggacttctaccagccaacctgtatcgttcttcagtgtggggctgactct
ctgggctgtgaccgactaggatgcttcaacctcagtatacgaggccatggggaatgtgtg
gagtttgtaaaaagcttcaggattcccctgctggtgctgggaggaggggggtacacagta
cgcaatgtggccagatgctggacctatgagacctccctcctagtcgatgagccaattagt
gatgagctgccctatagtgagtactttgagtattttgctccagacttcacactccaccca
gatgtgagcaccaggatagagaaccagaattcaagacagtacctggagcagatacgttca
acggtctttgagaacttgaagatgttgaaccacgcccccagtgtccagatccacgacgtg
ccctccgacatcctgagctacgagcgtactgatgagggagacccagatgagaggggctca
gaggacaactattccaggccggaggcagccaatgagttctatgatggtgaccatgacaat
gacaaggagagcgacgtggagatctga
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