Oncorhynchus tshawytscha (Chinook salmon): 112220713
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Entry
112220713 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112220713
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112220713
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112220713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf_RING_Vps8
zf-RING_4
zf-rbx1
Prok-RING_4
zf-C3HC4_4
TerY_C
IBR_1
zf-UDP
zf-Tbcl_FmdE
zf-ANAPC11
DZR
Rtf2
Motif
Other DBs
NCBI-GeneID:
112220713
NCBI-ProteinID:
XP_024238333
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All DBs
Position
LG21:complement(481042..483927)
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AA seq
192 aa
AA seq
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MSSTTQRKRRTGVPSSSRRTAKSSRVTTTSVRPRAAASAAVPETIDVLESSRTESEEVVD
LTCEGSELTVVDLTNNDSVVVVDEGPHGRREADSESYVLSSDEEEDTNGGLSADDLSSLQ
ASSRARSTPGTVSCPVCMDAYAEIIESGRLVVSTKCGHLFCSHCLRDSLLRSHTCPTCRK
KLTHKQCHPIYI
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacaacacagaggaaaagaaggactggagtcccttcaagttccagacgcacg
gccaagagtagcagagtcaccacaaccagtgtgcgacctcgtgctgcagcatcagcagca
gtcccagagaccattgatgtgctggaaagcagcaggactgagagtgaggaggtggtggac
ttgacatgtgaaggttctgagttgactgtggttgacttgaccaacaatgattctgtggtg
gttgtcgatgaagggcctcatggcagacgtgaagctgacagtgagagttatgtactgagc
agtgatgaggaggaggatactaatggaggcctcagtgccgacgacctgtcctctctacag
gccagcagtagagccaggtctactccagggacagtcagctgcccagtgtgtatggacgcc
tatgctgagatcattgaaagtgggaggctagtagtctccacaaaatgtggtcacctgttc
tgcagtcactgcctccgcgactcactgttgagatcccacacttgcccaacctgtagaaag
aaactgacccacaagcaatgccaccctatatatatttga
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