Oncorhynchus tshawytscha (Chinook salmon): 112220733
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Entry
112220733 CDS
T05605
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112220733
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
112220733
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nop14
BUD22
CDC45
Motif
Other DBs
NCBI-GeneID:
112220733
NCBI-ProteinID:
XP_024238360
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Position
LG21:3946643..4011307
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AA seq
870 aa
AA seq
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MADCASLLDEELTSFVFNYLTENSGSQYGEEEVCSDRLDADFPDIDLSQLDASDFDSVNC
LSELHWCNDQSDISAASIQYSTGDPEFFEIDENAALLAALTDSLDGMVEDEVGGLSVFPS
LGEGSEEDLPFPSGSLSDGSLSSETEDPSLLKKLLLSPPNVPTGLESHKEGSSNSGHRHC
SRSLHLKPVRPLVKRESTQERMPRAVRPAGRLCTELHRHLTSAQEAEDTPSADTEDEEDE
EEDDDDEDSESEEEEEEEESSSSESERSTPLEPTKPQFSSEKELKSVVELIKYMHTYCLP
MRKQAGWERKERECPGQVRRARPECPTTLIHPNCHKAAPQAQSCAPRPRLAFTRRREVKA
NSLLRELLKAVNSFDVSKPYRLHSPPYTHNRDAITKPAHDRKTETPSPTASSTKPEFMKE
RGLEVPLSPDLEDASFSVRRSRRLASFPSRFAKKVRAGWVREEPASGERRPDEEDKAVKH
PPGDDPEKDSTANNNSTSQTMADAAEPDNLCCQNEKRACLCLPLTPKSTGDTQYANRPFE
QTLSVDLCGTAGLTPPTTPPHKQVEDELFKPEGKGESTPKGSWLTRAHSRKLPEQTELYA
QLRKMGQAIDAEPKVHRTFGDHDYCLLSLGESRKRTAAMLAHSLFGRSSPEGDRAEHRVQ
GDKRLEQQREDRLFSKVPEYLSNGNRADRKGGALSPHNSDEEGERSSRSPSPILHSSCCQ
PHSPSSKPDFSCENSETCHGDKQRNNISKSVLQIDEDNCQVFYIHNLPSSVTQTMLRKRF
EAFGDPEDCKVITKHEERCGVIKFRPAPSGQQIQRHRREPLFQNGGGGMHRLSRKRYIDL
DEAGPGPVKSKYDALDFDTLLKEAQKSLHR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgcttcactgttagatgaggagctcacttccttcgtcttcaattacctg
acagaaaactccgggagccagtatggggaggaggaggtctgctcggaccgcctggacgcc
gacttccctgacattgacctctctcagctggacgccagcgactttgactcagtcaactgc
ctcagcgagctccactggtgcaacgaccaatcagacatctccgctgcctccattcagtac
agcacaggagaccctgagttttttgagatagatgagaatgcggcgctgctggctgctctc
acagacagcctggacggcatggtggaggacgaggtgggggggctgtctgtgtttccctcg
ctgggggaggggtctgaggaggaccttcccttcccttcaggctccctgagtgacggctcc
ctgagctcagagacagaagacccgtctctactgaaaaagctcctgctgtccccccctaac
gtgcccacgggcctggaatcacacaaagagggcagcagcaacagcgggcatcgccattgc
agcaggagcctgcatctgaaacctgtcaggcctttggttaagcgtgaaagcacacaggag
cgtatgccccgagcggtgcgaccagcaggacgtctgtgcacagagctccaccggcacctg
acctctgcacaggaggctgaagacactccttcagccgacacagaggatgaggaggacgag
gaggaagatgatgacgatgaggacagtgagtccgaggaggaagaagaggaggaggagtcc
tcgagcagtgagagtgaacgctccactccccttgagcccaccaagccccagttctcctcg
gagaaagaactcaaatctgtggtggagctcatcaagtatatgcacacatactgcctgccc
atgcgcaagcaggctggctgggagcgcaaggagcgtgagtgcccaggccaggtacgcagg
gccaggcccgagtgccccacgaccctgatccacccgaactgtcacaaggctgccccccag
gcccagagctgcgcccctcggccgcgcctcgcctttacccgcagacgggaggtcaaagcc
aactctctcctgcgcgaactgctcaaagcggtcaactcctttgacgtgagcaagccttac
agactccacagccccccctacacccataacagagatgctatcaccaagccagcgcatgac
agaaagactgagacccctagcccgactgccagctcaaccaaaccagagtttatgaaagag
cgcggcctagaggtccctctgagccctgacctggaggacgcctccttctcagtccgccgc
tcccgcaggctcgcctctttccccagccgcttcgccaagaaggtgcgtgcaggctgggtg
agggaggagcctgcgtccggggagcggcgccctgacgaggaggacaaggcggtcaaacac
cccccgggagacgacccggagaaagactccaccgccaataacaacagtacttcccaaacc
atggcagacgcagccgaacccgataacctctgctgtcaaaacgagaaacgcgcctgcctc
tgtctgccgctgactcccaaatctactggagacacacagtatgccaacaggccctttgag
cagactctcagcgtggacctgtgtggcacagcaggcctcacccctcccaccacccccccc
cacaagcaagtggaggacgagctgttcaagccagaggggaaaggagaatccacaccgaag
ggctcgtggctgacccgggcccactcccgcaagctccccgagcagactgaactctacgcc
cagcttcgcaagatgggccaggccatcgatgcagaacccaaagtccacaggacgttcgga
gaccacgactactgcctgctgagtctgggggagagccggaagagaaccgccgccatgctg
gcccactcgctgttcggacgctcctctccggagggggacagggctgagcacagggtccaa
ggggacaagaggctggaacagcagcgtgaagacaggctcttttccaaggtgccagagtac
ctgagtaacggtaacagggctgacagaaaggggggcgctttatccccccacaactcagat
gaagagggggaacgctcctcccgttcaccctcccccattctccactccagctgctgccag
ccccactcgcctagcagcaagcccgacttcagctgtgagaactctgagacgtgccacgga
gacaagcagagaaacaacatctccaagtctgtgcttcaaattgacgaggacaactgccaa
gtgttctacatacacaacctgccaagcagcgtcacacaaacgatgctgcgcaaacgcttc
gaggcctttggagacccggaggactgcaaagtcatcaccaaacacgaggaacgctgtgga
gtcatcaagttccgtccggcacccagcgggcagcagatccagaggcacagacgagagccg
cttttccagaacggagggggtggcatgcacaggctcagcaggaagagatacatagatctg
gacgaagctggaccagggccggtgaagagcaagtatgacgccctggactttgacaccctg
ctgaaggaggcccagaagagcctgcatcgctga
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