KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112220739
Entry
112220739         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 3B
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112220739
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     112220739
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112220739
SSDB
Motif
Pfam: JmjC AsnC_trans_reg2 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 112220739
NCBI-ProteinID: XP_024238368
LinkDB
Position
LG21:complement(4627762..4649465)
AA seq 1866 aa
MGDSLELIGKRLLLLLNDGRSAAGSEVEQAAWTRDWLRGTVRAVSVIGLASPGVEVSGGE
ATTTTAAAAGLTVFVEFEDCAWRRRSWVQVYGEEVRAVLVESSIVWANRSSDPNQNHPAA
GGAPGTAWPALAFRSLVDRVGLGSLVPVEFFGNRTLDFLPDGNSLQRFEVEKDVGHSLLL
EQPSLQAAVSSWHSDFELQEILRKGSYTIQGRRVQVYQCEFDEHWALGLVSRHDPNSHIM
EITMDQEEETQVVDPRVMHVILAEDRFDENGRNARRRKESDGVKGESGRRRRTSSEGEED
VTLKRFKGAGEGAAEGQNGSGSTKGMVTWGEEVATGGEDGVGGGGRVNSTTNNNSSSSEV
TQGHATPNSISSHMDQSKAPPRYPKENGRSLSTQDRQGSADSTTTVTPTPPPQTSPLPIL
QHFLPLSGPDAQPGPWSSGLQAFPSSPDHRERGASQSTYPKTAALVSPGPVTISSPSQGS
APSVALAAPLCFSPKLSAWTGPPNQTEGSKPILAAAGFRLPQSKPAGASVFGEVSSQTNG
SSNTASVSQDTPGPFGFSFRGAKNNEAQPQQQDQNLFFQCMSQKTGQNPGGSNQNQTSGL
GQSQAKDTNYFTAVSESLSKEPPSLFKPSASTEGLKKTVLAPASTGLFGSATAHLKEQSK
VPETQPAGNGVLNKPFGGDKLSSSFSGGSGGMRSSVLGMAAIGTPLAPASGSLGGANRSG
TNGGAVGGFSTKTDSHQNLFLQGSKEPSNPFLAYGEKLSHSPFSGKPSPLEPETLGPATA
SESKPNLFTMSEPPKGILSSPFASLSGAAASSSSSPAPGPAFIQRPQSDAPSKPREGAST
GEQGSSAEGGSLDDRPSSTSGYPMFGSAVPGGSGEDAPMPFDQGQAQKFALEERGQVSKR
DSDSSDNSDLSDLSETEEGLERGQVPGGLPGPVKEGAMLLQKGKGPGVAKSRPRNKPFKV
GQSVLKDVTKVRRLKQSGESFLQDGSCINVAPHLHKCRECRMERYRKYREQEPDDDDPNV
ACRFFHFRRLAFTRKGILRVEGFLSPQQSDAMAMGLWLPSPSVQEGLDLDTSKYILANVG
DQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLD
CYRQRRNRPLEEVDEGPDDEVFSWLKCVKGQRHEPQSLMPTQIIPGTALYNIGDMVHSAR
GKWGIKANCPCTSRHHRPLVRHSAPNGISQQSAVSSSIGSSGSGPITGGGGPAGSTTPKP
EGGETTVVKTQPTSSTTPSEAAGGGVDTNSTNSTSGPPNSAQTTTPKDPRPSTGEGNSTA
LHWLADLATQKAKVEDTKDSGLLRSAMGRDTRSPFGLDSFSALSKPSSSSSSSSSPKLFN
SLLLGSSNTQPKPEGSSLRDLLNSGPGRLPQAPGDTGIPFPSVFSTSAAGDKMKGSLPNF
LDHIIASVVETKKAEGRRTGEGGSELGGVGRRDGVMGLSVLDPHTSHSWLCDGRLLCLQD
PSNTNNWKIFRECWKQGQPVLVSGIHKRLKGGLWRPEAFSEEFGDQDVDLVNCRNCAIIS
DVKVRDFWDGFQVISKRLKGSDGQPMVLKLKDWPPGEDFRDMMPTRFDDLMENLPLPEYT
KRDGRLNLASRLPNFFVRPDLGPKMYNAYGLIETEDRSVGTTNLHLDVSDAVNVMVYVGI
PEGEGEHVKEVMSTIEEGDVDEMTKRRVYEAKEKPGALWHIYAAKDAEKIRELLRKVGEE
QGQENPPDHDPIHDQSWYLDGVLRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLY
SCIKVAEDFVSPEHVKHCFRLTQEFRHLSTTHSNHEDKLQVKNIIYHAVKDAVGTLRAHE
PKLARS
NT seq 5601 nt   +upstreamnt  +downstreamnt
atgggagactctcttgaactgattgggaagcgacttctgctgctccttaacgatggcaga
tccgcagccggatccgaagtggaacaggccgcctggactcgtgactggctccgggggacc
gtccgggcggtcagcgtcatagggttggccagcccaggggtagaggtgagcggaggagag
gcgacaacaacaacagcagcagctgcggggctgacggtgtttgtggagtttgaggactgt
gcgtggcgcaggcggtcctgggtacaggtgtacggggaggaggtgagagctgtactggtc
gagtcctccatcgtctgggctaaccgcagcagtgaccccaaccagaaccaccctgcagct
ggaggagcccctgggacagcctggcctgccctggcgttccggtctctagtggaccgtgtg
ggtttgggttccctggtccctgtggaattcttcgggaaccgaaccctcgacttcctccct
gacgggaattcactccagagatttgaggtagagaaagacgtgggacactctctcctgctg
gagcagccatctctgcaggctgcggtgtccagctggcacagtgactttgagctgcaggag
atcctcaggaagggctcctacacaatccagggcaggagggttcaggtttaccagtgtgag
tttgacgagcattgggccctgggcctggtctctcggcacgaccccaactcccacatcatg
gagattaccatggaccaggaagaggagacccaggtggtggatcctcgggtaatgcacgta
atactagctgaagatcgatttgatgagaacgggaggaatgctcggcggaggaaggagagc
gatggcgtgaagggcgagagcggccgtagacggaggacatcatcggaaggcgaggaggac
gtgactctgaagcgttttaagggggcgggagagggagcagcggagggacagaacgggagc
ggctccaccaaggggatggtgacgtggggtgaggaggtagcaaccggaggagaagacgga
gtgggtggaggaggcagagtgaacagcactaccaacaataacagcagttcctctgaagtc
acacaaggtcacgccaccccgaacagcatttcctcccacatggaccaatcaaaagctccg
ccgcggtaccccaaggaaaacggacgctccctctccacacaggacagacaggggtctgct
gactcgaccactacagtcacccccaccccaccccctcaaaccagccccctccccattctc
caacacttccttcccctctctgggccagatgcccagcctggtccctggagctccggcctc
caagccttccccagcagccctgatcacagagagcgaggagcatcccagtctacctacccc
aagacggctgccctggtgtcccccggcccggtgaccatctcgtccccatcgcagggcagt
gcccccagcgtggccctcgctgctcccctgtgcttcagccccaaactaagcgcctggaca
ggaccacccaaccagacggagggctctaagcccatcctggctgcggctgggttccggctg
cctcagtccaagcctgctggtgcttctgtgttcggagaggtaagctcccagaccaacggt
tcctccaacacagcgtcagtctcccaggacacccccggacccttcggcttttccttcaga
ggcgccaagaacaacgaagcccaaccgcagcagcaagaccagaacttattcttccagtgt
atgagtcagaagactggccagaaccctggtggttctaatcagaaccagacttcaggcctg
ggtcagagccaggctaaagacaccaactacttcacagcagtgtcagagagcttgagtaag
gagcctcctagcctgttcaagccctccgcctccacagagggactcaaaaagactgttcta
gcccccgcttcaactggcctgtttggctcagctacagctcatctcaaagagcagtccaaa
gtgcctgagacccagccggcaggcaacggagtgctcaacaagcctttcggaggggacaag
ctctcgtcttccttcagcggcggctctggggggatgaggagctctgttctgggaatggct
gcgatcggcacccccctggctccggcttctggatctctgggtggtgctaacaggagtggc
actaacggtggcgcggtgggtggcttcagcaccaagacagacagccaccagaacctgttc
ctccagggctccaaggagccttccaaccccttcctggcctatggggagaagctctcccac
agcccctttagtggcaaaccatcccccctggagcctgagacactgggccctgccaccgcc
tcggagagcaaacccaacctatttacaatgtccgagccgcccaagggcatcctgtcttcc
cccttcgcctccctctcaggcgccgctgcctccagttcttcctccccagccccaggacct
gccttcatacagaggccccagtctgatgccccctccaagcccagggagggcgcctccaca
ggggaacagggctcctcggctgagggtgggtctctggatgaccggcccagctccacctcg
ggctaccccatgtttgggagcgctgtccctggggggagtggtgaggatgcgcccatgcca
tttgaccagggccaggcccagaagtttgccctggaggagcgaggccaggtatctaaacgt
gactctgactccagcgataacagcgacctgtcagacctgagtgagactgaggaggggctg
gagagagggcaggtccctgggggcctcccggggcccgtcaaggagggagccatgctactg
cagaagggtaaaggccccggggtagccaagagccggccacgcaacaagcccttcaaagtg
ggccagtcagtgctgaaggacgtgactaaggtgcgtcgtctgaagcaatcaggagagtcg
ttcctgcaggacggctcctgtatcaacgtggcgccccacctccacaagtgtcgcgagtgt
cgcatggagcgctacaggaagtaccgggagcaggagcctgacgacgacgaccccaacgtg
gcctgccgcttcttccactttcgcaggctggcgttcacgcgtaagggcatcctgcgtgtg
gagggcttcctgagcccccagcaaagcgatgccatggccatggggctgtggcttccctcg
ccgtccgtacaggagggcctggacctggacacctcaaagtacatcctggccaacgtggga
gaccagttctgtcagctcgtcatgtctgagaaggaggccatgatgatggtcgagcctcac
cagaaagtggcgtggaagcgggcggtgcgcggcgtcagggagatgtgtgatgtgtgtgag
accactctcttcaacatccactgggtctgcaggaagtgtggcttcggggtgtgtctggac
tgctaccggcaacggaggaaccgccctctggaggaggtggatgaggggcctgatgacgag
gtgttctcctggttgaagtgtgtcaaaggccagagacacgagccccagagcctcatgccc
acacagatcatacctggaacagctctctataacataggggatatggtgcactcagcccgg
ggcaaatggggcatcaaggcaaactgcccctgcaccagccggcaccacaggcccctagtg
cgccatagtgcccccaacggcatctcacagcagtctgcagtgtcctccagcatagggagc
agtggtagtggaccaatcacaggtggtggggggccagcgggttcaaccactcctaaaccc
gaggggggggagacaacagtggtcaaaacacagcctacatccagcacaacgccatccgag
gcggcaggaggaggggttgatactaactccaccaacagtaccagtggcccccctaactct
gcccagaccaccacccccaaggacccccgcccttccacaggtgagggcaactccaccgcc
ctgcactggctggcagacctggccactcagaaagccaaggtggaggacactaaagactct
gggttgctgcgctcggcgatgggccgggacacgcgttctcccttcggccttgactcgttc
agcgccctgtccaagccttcgtcgtcctcctcttcctcctccagtcctaaactgttcaac
agcctgctgttgggctccagcaacacccagcccaaaccagagggctccagcctccgagac
ctgctcaactctggccccgggaggctcccccaggcccccggagacactggaatacccttc
ccctcagtcttctccacctcagccgctggggacaagatgaagggcagcctgcctaacttc
ctggaccatatcattgcctcggtggtggagaccaagaaggcggagggccgtcgtacgggc
gagggaggcagcgagctgggcggggtgggccgcagggacggggtgatgggcctcagcgtg
ctggacccccacacctcccactcctggctctgtgacggacgcctgctctgcctgcaggat
ccctccaacaccaacaactggaagatcttcagagagtgctggaaacagggccagccggtg
ctggtgtctggtatccataagcgtctgaaggggggtctgtggcgacctgaggccttcagt
gaggagtttggggaccaggatgttgacctggtcaactgtcggaactgtgccatcatttct
gacgtcaaggtccgtgacttctgggacggcttccaggtcatctccaagcgtctgaagggt
agtgatggtcagcccatggttctgaagctgaaggactggcctcccggagaagacttcaga
gacatgatgcctacacgctttgatgatctgatggagaacctgcccctcccagagtacaca
aagcgagacggccgtctgaacctggcctcccgcctgcccaacttctttgtcaggccagac
ctggggcctaagatgtacaatgcctacggtctgatcgagaccgaagaccggagtgttggc
actaccaacctgcatctggacgtgtctgatgccgtcaacgtcatggtgtacgtgggcatt
cccgagggagagggggaacacgtcaaggaggtgatgagcaccatcgaggagggtgacgta
gacgagatgaccaagaggagggtgtacgaggccaaggagaagcccggggcactgtggcac
atctacgctgccaaggacgcagagaagatccgggagctgctccgcaaggtgggtgaggag
cagggccaggagaaccctccggaccacgaccctatccatgaccagagctggtacctggac
ggggtgctgcgcaggaggctgtacgaggagtacggcgtgcagggctgggccatcgtacag
ttcctgggagatgctgtcttcatccccgccggggctccccaccaggtgcataacctgtac
agctgtatcaaggtggcagaggactttgtgtcccctgagcatgtgaagcactgtttcaga
ctgacccaggagttcagacacctatccaccacacactccaaccacgaggacaagctgcag
gtaaagaacatcatctaccatgctgtaaaggacgctgtgggaacactgagggcccacgaa
cccaagctagcacgctcttag

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