Oncorhynchus tshawytscha (Chinook salmon): 112220755
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Entry
112220755 CDS
T05605
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112220755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220755
03036 Chromosome and associated proteins [BR:
otw03036
]
112220755
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
112220755
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
112220755
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112220755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_3rep
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
112220755
NCBI-ProteinID:
XP_024238400
LinkDB
All DBs
Position
LG02:complement(17216851..17228605)
Genome browser
AA seq
1598 aa
AA seq
DB search
MSVLGTNKARKLLERARQACLGGFRGPKQTGGTKPIVTEMWDTEEGPNEEDERPSPSPGP
SQGTLESSTMGSNSLSQAQFISAAMREKDEEGDEEDPGDLQQRPSQSARSATEAESEDRC
EQPDLPLSHSSPGEVGPGSLQTASSLPRPEPEADPYLDPDLEGDPHGEESHPCQHCERHF
STKQGLERHTHIHATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLA
GTATLLSPLGQADCSSPDCATVSGHYVVMGSPLPGGLMQSPQVVRKDPAAESDQPFIVDE
NGETKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPQQQQQRLPE
QSPSASPPPVYVPSADTEDEGDREEYMVDISNNISENLSLYIDGKILSTSSVSGCEVIEV
DSSSAALFGLDAVVISPNQISQAFKVDTRTCAVKQVSNLGQPTTKRRTSTPPLMPSLKME
SENGSSSASSSSTSSSSTLLVESPFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDGQKPT
IALIADSHRLAPPLSVTSLPAASGRFKRRTASPPSSPQLSPALKADGCKSEAGVSSYTLK
VPKLESLGISSAWSLSSKEERDTLSPSGKDGCSWSASRTGGNSCNQQPLDLSSGISKWSD
GFNKTPREEVLDLSMSRKSTAEPREGEVQLRHKGSPAPTQPHTKKKKPNTSMLEKVLMNE
YAGLNPAGEEGSCALGSPDSQYTASSGTGTASHSPSSNMPFESADPSPPSLTPVTMNPSS
PCVSSLTSPTPPPPVLPSMPSSDCPTSSSLPDLSPKMSPRSIDHCEDEPVCVSNSTTAET
ILAAVSNSYGDVTKPVDPTHNTDPVIGKALSNPSTESPSVSDAVPVSLSSAQSKPARSGN
HIFLDIQINPDLEPIITEGQGKSQCSELPVLSPVTESPLTASSIIPVGISDVPAPSVVSP
ASLSSTVIKEEVQHMDQLADLGLPPGATGSLPPSAAAAEKPSEEVVEEEGLEPDPFSKSF
VCNVCEDPFRSIKELSRHIVEHAAEWPYRCEFCVQLFGNAPALLEHRTALHGVGRIFVCS
FCSKEFAFLCNLQQHHKDLHPSQPCTHAAVESGKLRSQNYTDPARAKEESNPSTTGPESS
AEAASSQGFSDVKKEQPDTNGKHEEAGPEDPTEELYTTIKIMASEGGKPKGPDVRLGINQ
HYPSFKPPPFPYHNRTAADSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHIL
ACANASDKRRYTPKKNPIPLRQIVKPQNGALSPASAANAGHNAFRRMGQPKRLNFNQEPL
GKTKMSSLSKKKNQLVQKAITQRNKTAATAKAPSQVKEEEPQEVHVCPHCSREFTYPASL
SKHIAVSCPMKPVSKKAKKGAAAEEATPAVDKNMSLRRRTTDSEIQQPETAELVPKTLGK
TRARTSGPGSAEAETTLRPGKGKTAVTQVRTKRPASFPAATVSLNMKSKKGKVQSLPPTP
LPSETPSNSAPLPATQTKQRTGKEMLPKKVAEVKLPLQKPSQVPPKKEGERFSLRARERA
GGPVTRSLQIANNVAPVEVKTEDLSSQGPKETQESLLK
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcttggcaccaacaaagccagaaaactgttggaaagagccagacaggcttgt
ttgggtggattccgtgggcccaaacaaacaggcggaaccaaacctattgtcacagagatg
tgggatacagaggaaggtccaaatgaggaggacgagagaccctctccttctccagggcct
tcacaggggactctggagagctccaccatggggagtaacagcctctctcaagcccagttc
atctcagcagcaatgagagagaaagatgaggagggtgatgaggaagacccaggggatctg
cagcagcggccgtcgcagagtgctcggtctgctactgaagctgagtcggaggataggtgt
gagcagcctgatctgccactaagccatagcagtccaggtgaggtggggcctgggagcctt
cagactgcctcatccctaccaaggcctgaaccagaggctgacccatacctcgaccctgac
cttgaaggtgatccccacggagaggagtcccatccctgccagcactgcgagcgccatttc
tccaccaaacagggcttggagcgccacacccacatccatgccactgcaaaccagcaaacg
cacacgttcaaatgccgttactgtggcaagtcctttggctcgcaggtgggacgtcggcgg
cacgagcggaggcatgagaacgggccaaagaacaaaggccaaaggcctggctcactggct
gggactgctactttactcagtcctctggggcaggctgactgttccagcccagactgtgcc
actgtctctggccactacgttgtcatggggtccccgctccctggaggacttatgcagagc
cctcaggttgtgaggaaggaccctgcggctgagagtgaccagccctttatcgtggatgag
aatggagagacaaaagagcttcatccttgcaagtactgtaataaggctttcggcactcac
actaacatgcgccgacaccagcgcagaatccacgagcgccacttactgcccaagggtgtg
cgcaggaaaggcatgctgctgcaggagagcccgcaacagcagcagcagcgtctgcctgag
cagtcccccagtgccagcccaccccctgtctatgtgcccagtgcagacactgaggatgag
ggggaccgagaggagtacatggtcgacatatccaataatatctcggagaacctcagcctg
tacatcgacggcaagatcctgtccactagttcagtcagcggctgtgaagtgatcgaagtg
gactccagttctgcagcactgtttggtctcgacgcagtggtcatcagccccaatcagatc
agtcaggctttcaaagtggacaccaggacctgtgctgtgaagcaggtctccaacctcggc
cagcccacgacgaaaaggagaacgtcgacacccccgctcatgcccagtcttaaaatggag
tctgaaaatgggtcctcctctgcctcttcctcctccacgtcttcctcatctaccttgttg
gtggaaagtcccttccctcagtcctcagactcattagcatttcaaaaggagaaaactatc
tatctgtctcctaagctcaaacagctcctccagactcagacagacggtcagaaacccacc
atcgccctgatagcagacagccacagattagctccccctctctccgttacatctctgcct
gcagcctcaggcaggtttaagagaagaacggcttcccctccctcgtctccacagctcagc
cctgcgctgaaagcagatggctgtaagagcgaggcgggggtctcgtcgtacaccctcaag
gtgccaaagctggagagcctgggcatttcctctgcctggagtctgtccagcaaggaggag
agggacacactgagtcccagcgggaaggacgggtgcagctggtctgcctctcggaccgga
gggaactcctgtaatcagcagcccttggacctttccagtggcatcagtaaatggagtgac
ggcttcaacaagacgcccagggaggaagtgctggatttaagcatgagtcggaagagtaca
gcagagccaagggaaggggaagtccagctccgacacaagggaagtccagctccgacacag
ccccacaccaagaagaagaagcccaataccagtatgctagagaaggtgttgatgaatgag
tacgctggcttaaacccagcaggagaggagggctcttgtgccctgggaagcccagattct
cagtatactgcaagcagtggtacaggcacagcttctcacagtccctcttccaatatgccc
tttgaatcagccgatccctctcccccctctctaacccctgtcactatgaatccctcctcc
ccctgcgtctccagcctgacctctccaactccacctccccctgtcctaccctctatgccc
tcatcagactgccccacttccagctctctccctgacctctcccctaaaatgtcccccaga
tccattgaccattgtgaggacgagccagtttgtgtatctaactctactacagcagagaca
atattagctgcggtaagtaacagttatggagatgtcactaagccagtagaccccacccac
aatacagatcccgttatcgggaaagctttatcaaacccctctacagagtccccctcagta
tctgatgctgtccctgtgagtctgtcctcagcacaatctaaacctgctaggagtgggaac
cacattttcttagatatccaaattaacccagacctggaaccgattattactgagggacag
gggaaatcccaatgctctgaactccctgttttatcacccgtaacagaatcccccctcact
gcctcatcgatcattcctgttggaatatcagatgtcccagctccgtcagtggtctcccca
gcatcactctctagcactgtgattaaagaggaggtccagcacatggatcagctggctgat
ttaggccttcctcctggtgccacagggtctttacctccatctgccgctgctgctgaaaag
ccctctgaagaggtggtggaggaggagggattggagccagaccccttcagtaagagcttt
gtgtgtaacgtgtgtgaggatcccttccgctccatcaaagagctcagtcggcacatcgtg
gagcacgcggctgagtggccctacaggtgtgagttctgtgtgcagctgttcgggaatgcc
cctgccctgctggagcaccgtacagccctccatggtgtgggacgcatctttgtctgctcc
ttctgctccaaggagttcgccttcctctgcaacctccagcagcaccacaaagacctgcat
cccagccagccatgcacacacgcagcggtggagagtggcaagctgaggtcacagaactac
acagacccagccagggccaaagaggagagtaacccctcaaccacagggcctgagtcctct
gctgaagctgcctcctcccaggggttctctgatgtgaagaaagagcagcctgatactaac
gggaagcatgaggaggctggaccagaggacccaactgaagagctctatactacaataaag
atcatggcttctgaaggaggcaagcctaaaggcccagacgtacgcctgggcattaatcaa
cactaccccagtttcaagccaccccccttcccctaccacaaccgcacggctgcagactca
gtggcctcggccaccaacttcactacccacaacatcccccagacattcagcactgccatc
cgatgcaccaaatgcggcaagagctttgataacatgcccgagctgcacaagcacatacta
gcctgtgccaacgccagtgataagaggcggtacactcccaagaagaaccccatccctctc
agacagatagtgaagcctcagaacggagctctgtcgcctgcctctgctgccaacgcaggg
cacaacgccttccgcagaatgggccaacccaagaggctgaacttcaaccaagaaccgctt
ggcaaaaccaagatgagttccctcagtaagaagaagaaccagctggttcagaaggccatc
actcagaggaataagactgctgctactgctaaggcccctagccaggttaaagaggaggag
ccgcaggaggtccatgtgtgccctcactgcagtcgggagttcacttatcctgccagcctc
agtaaacatatagcagtcagctgtcccatgaagcctgtctctaaaaaggccaaaaaggga
gcagcagcagaagaggcaacaccagctgtagataaaaacatgagccttcgaaggagaacc
acagactctgagatccagcagccagagactgctgagctggtgcccaaaaccctgggcaaa
acacgcgctcgcacttctggacccggctctgcggaggctgagaccacactgcggccaggt
aaaggaaagactgctgtcacacaggtgcgtacgaagaggccagcctctttccctgctgcc
acagtttctctcaacatgaaaagtaaaaaaggcaaagttcaatcattaccccccaccccg
ttgccctccgagactcccagtaactctgcaccactgccagcaacccagacaaagcaacgc
acgggcaaggaaatgctgcctaagaaggtagcagaggtgaaattgcccctacagaagccg
tctcaggtgccgcctaagaaagaaggggaacggttctctctgagagcgagggagcgagct
ggtgggccggtgacccggagcctacagatagccaacaatgtagctcctgtggaggtgaaa
acagaggacctgtccagccaggggcctaaagagacccaggagtccttgctgaaatga
DBGET
integrated database retrieval system
