Oncorhynchus tshawytscha (Chinook salmon): 112220782
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Entry
112220782 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112220782
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112220782
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
112220782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
HAT1_C
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
112220782
NCBI-ProteinID:
XP_042158858
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All DBs
Position
LG21:6337190..6352361
Genome browser
AA seq
1009 aa
AA seq
DB search
MSGQKRMCDSNISSSSSSAPPEKRREREGGEDGGPGVSSAAGGSTAVETVIKLGGVSNSE
EQDVKALQVKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDDNV
CLIGRRYDESGSESVETPAGEGRSLKPDTPEPDGDSNQERAKDRGHQGETTTSFLATLAS
SSSEEMEAELQERVESSQKQANRVVEIYDSLKTTVEQLKKDQDSGAEGSVWQVAAQLNTL
LSSENDRLRQLTEDLQQKHSHMTSESRSLGRAVARADTRVSELQGLIEELQWDMEKIRRR
ENRLNTHLGEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSE
LQRRQQDLQTFNQENNNMKVELLSRAEGVVRESSEYRCLQSQFSVLYNESVGLKSQLDET
RTRLNTTRTARLRQLEHMENDEVSLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAA
NEQAGPINREMRHLISTLQTHNQHMKGEVVKYKLTLREAQTDLSQARTTKGSAILQSQSS
TELDLKEETTSPLTPAASADVTIKMESDNGSATPTSTSTSVKTEPGTETEGEIKEEEKEK
EVKKEKEKERERXERERPTRGGGGTEEKEKAGTSNQLEEVAPERTFVIGGPKRKEVEQLK
IVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSEAEELKQRLRDLEER
ERREGKKMADEEALRKICSVEEQINILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNI
RLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEE
KERLLQGTIGTAERELALRTQALDMNKRKTQESTVLSEEVRSQLDQVQQRLGTVREEVIE
NSISKEKQSFNARRAQEDISKLRRKIEKAKKPAETVRNGDDILNEEINDYKARLTCPCCN
SRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtatgtgtgactccaacatctcctcttcatcctccagtgcgccc
cccgagaaacggagggagcgagagggaggagaggatgggggtccaggggtcagctctgct
gcaggagggagcactgctgtggaaacagtcatcaaactcgggggggtttcaaattcggaa
gaacaggatgtcaaagctctccaggtgaagaataggaagttgggagaatccctcgatcag
agacaggtgattgaggatgagctgagagagagaatcgagagactggagactcgtcaagct
actgatgacgcaagcctactgatcctgaacagatactggaatcagtttgacgacaatgtg
tgcctgattggaaggcgctacgatgagtcagggagcgagtctgtggaaaccccggctgga
gaggggcggagcctcaagcctgacaccccagaacccgacggcgactccaaccaggagaga
gccaaagaccgaggccaccagggggagacgaccacatctttcctggcgacgctggccagc
agcagcagtgaggagatggaggcagagctgcaagagagggtggagtccagccagaagcag
gccaaccgcgtggtggagatctacgacagcctgaagaccaccgtggagcagctaaagaag
gaccaggactctggagcagagggctccgtgtggcaggtcgccgcccagctcaacaccctc
ctgtccagtgagaatgaccggctgcgtcagctgactgaggaccttcagcagaagcacagt
cacatgactagcgagtctcgttctctgggcagggcagtggcgagggcagacacgcgggtc
agtgagctgcagggcctcatcgaggagctccagtgggacatggagaagatccgacgcaga
gagaaccgcctcaacacacacctgggagaaatcctggagagggtaaacagtaaaggctac
aaggtgtgtggggaggccagcagtgtgtgtggaaccattaccatcaacaagagaaagttt
gaggagatgaacagtgagttggaggagaacagggagctggcggagaaccgtctgagcgag
ctgcagcggcggcagcaggacctgcagacgtttaaccaggagaacaacaacatgaaggtg
gagttgttgagtcgtgctgagggggtggtgagggagagctcagagtaccgctgtctccag
tcccagttctctgtcctctacaacgagtctgtgggccttaagtctcagctggacgagacg
cgcacacgcctcaacaccaccaggacggcacgcctccgacagctagaacacatggagaat
gacgaggtgtcactccagaggaaggtgcgtactgaggtgttccagctagaggacactctg
gcccaggtcaggaaggagtatgagatgctccggatcgaatttgaacagaccctcgctgcc
aacgaacaagcaggtcctatcaacagggagatgcgtcacctgatcagcaccctgcagaca
cacaaccagcatatgaagggagaggttgtgaaatacaaactgacactcagagaggcacag
actgacctcagccaggctcgtactacgaagggcagtgctatccttcaatcacaatccagt
acggagctggacctgaaggaagagaccacctcccctctgacgcccgctgcctctgctgat
gtcaccatcaagatggagtctgacaatggttcagccacgcccaccagcactagtacctca
gtgaagacagagcctgggacagaaacagagggagaaatcaaagaggaggagaaagaaaaa
gaggtgaagaaagagaaggaaaaggaacgagagaggngagagagagagaggccaacccgt
ggagggggtgggaccgaggagaaggagaaggctgggaccagcaaccaattggaagaggtt
gctccggagcgcacgtttgtgattggaggaccgaagaggaaggaggtggagcaactgaaa
attgtccgggcggagctaaagaaagcccaggagtctcagagggagatgaagctactgctg
gatatgtaccgctccgcgcccaaagagcagagggacaaagtccagctcatggctgctgag
aagaaggccaagtcagaggcagaggagctgaagcagcgtctaagggatctggaggagagg
gagaggagggaggggaagaagatggctgatgaggaggcactccggaagatctgctctgtc
gaggaacaaatcaacatcctcaacaagaagctctccctggccaagcaggaggaggatgcg
ttgctgagtgagatggacgtgacgggccaggcctttgaggacatgcaggagcagaacatc
cggctgatgcagcagctcagggagaaggacgacgccaacttcaagctgatgtcggaacgc
atcaagtccaaccagatccacaagctgctcaaggaagagaaggaggagctcgccgaccag
ctgctcacactcaaaacgcaggtggatgcccagctgcaggtggtgaggaagctggaggag
aaggagcgcctcctccagggcacgatcggtactgcagagagagagctggctctgaggaca
caagctctggacatgaacaaacgcaagacccaggagtctacggtgctgtcggaggaggtg
cgtagtcagctggaccaggtgcagcagagactgggcaccgtcagggaggaggtcattgag
aacagcatctccaaagagaagcagtccttcaatgcacgccgcgcacaggaggacatctcc
aaactgcggaggaagatcgagaaggccaagaaacccgcagagaccgtccgcaacggcgat
gacatcctcaatgaggaaatcaacgattacaaggctcgtctgacctgcccgtgctgtaac
tcccgggtaaaggacgccgtcctgaccaagtgtttccacgtcttctgcttcgagtgcgtc
aagacacgctacgacacgcgccagaggaagtgccccaagtgcaacgccgccttcggcgcc
aacgacttccaccgcatctacattgaatag
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