Oncorhynchus tshawytscha (Chinook salmon): 112220820
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Entry
112220820 CDS
T05605
Name
(RefSeq) F-box and WD repeat domain-containing 11-B
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04114
Oocyte meiosis
otw04120
Ubiquitin mediated proteolysis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112220820
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112220820
04340 Hedgehog signaling pathway
112220820
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
112220820
04218 Cellular senescence
112220820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112220820
03036 Chromosome and associated proteins [BR:
otw03036
]
112220820
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112220820
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112220820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
EIF3I
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
Motif
Other DBs
NCBI-GeneID:
112220820
NCBI-ProteinID:
XP_024238484
UniProt:
A0A8C8C1H6
LinkDB
All DBs
Position
LG21:complement(7780714..7802908)
Genome browser
AA seq
528 aa
AA seq
DB search
MEPEIEDKTLELMNTSVMESQNHVDDLSPKKTVLTKLSNGPVMTGSRKRPSEGNNDKEKE
HCISLFDQWSETDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAEN
ILSFLDAQSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKN
RTTEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKII
SGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVLN
TLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDK
YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGA
CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR
VFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggagattgaggacaaaacgttggaattaatgaacacatcagtcatggagtct
cagaaccacgtagacgacctctcgccaaagaagacagttctcaccaagcttagtaacggt
cctgtgatgacgggctctcgtaagcgcccgtcggaggggaacaacgacaaggagaaggag
cactgcatctccctgtttgaccagtggtctgagactgaccaagttgagtttgtagaacac
ctcatctcccgaatgtgccactaccaacacggccacatcaactcctacctcaaacccatg
ctccaacgagacttcatcacagcactgccagcccagggtctggaccacatagcagagaac
atcctgtcgttcctggatgcgcagtctctatgctccgcggagctggtgtgtaaggagtgg
cagagggtgatctcagagggcatgctctggaagaaactcatagaacgcatggtccgcaca
gaccccctctggaaaggcctgtccgagaggcaccagtgggagaagtatctgttcaagaac
cgaacgacagaggtcccgcccaactcctactaccactccctgtaccccaagatcatccag
gacatagagactatcgaggctaactggcggtgtggcagacacaacctgcagaggatccag
tgtcggtcagagaacagtaaaggagtctactgcctccagtacgacgacgataaaatcatc
agcggcctgagagacaactccataaagatctgggacaagcagtctctggagtgtctgaag
atcctgacaggtcatacagggtcagtgttgtgtctgcagtatgatgagagagtcatagtc
actggttcctccgactccactgtcagggtgtgggacgtgacgtcaggtgaggtattgaac
accctgatccatcacaacgaggcggtgctccacctgcgcttctgcaacggtctgatggtg
acgtgttccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatcagc
ctccggcgggtcctcgtgggtcaccgtgccgccgtcaacgtggttgattttgacgacaaa
tacattgtgtcggcttcgggggaccgcaccatcaaggtgtggagcaccagtacgtgtgag
tttgtgcgcacgctaaacggacacaagcgaggcatcgcctgtctgcagtacagagacaga
ctggtggtcagtggctcctcggacaacaccatacggttatgggatattgagtgtggagcg
tgtttgcgagtgttggaaggtcatgaggaactagtccgctgcattcgctttgacaacaag
aggattgtcagtggtgcctatgacggtaagatcaaggtgtgggacctgcaagctgccctg
gacccacgagccccagccagcaccttgtgtctgcgcacactggtggagcactcgggccgc
gtgttccggctgcagtttgacgagttccagatcatcagcagttcccatgatgacaccatc
ctcatctgggacttcctgaacgtgtcgaccaatggacagtcagagggccggtccccctca
cgcacctacacctatatctccagatag
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