Oncorhynchus tshawytscha (Chinook salmon): 112220870
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Entry
112220870 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 6-like isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112220870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220870
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112220870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_9
CH
SH3_1
RhoGEF67_u1
PH
CENP-Q
HAUS-augmin3
Mis12
Motif
Other DBs
NCBI-GeneID:
112220870
NCBI-ProteinID:
XP_042158990
LinkDB
All DBs
Position
LG21:complement(9280716..9313615)
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AA seq
772 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKTSLKDGVVLCKLMERLVPGSVPKYCQDP
RNEADCIANIKEFLRGCTFLKVEGFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
QSGTSAPSQSTSSHTLSSSKSLRRPSKPVEMSENGGGGLLLVKARFQFKQNNEDELSFNK
GDLIGVSRQEEGGWWEGTLNGKTGWFPSNYVREVKPCDKPVSPKATQLTKNYYSVVVQDI
QEHEREFVKELQTVLSSYLRPLLASDKLSVTDSGILGANLEEILTFQQGLVLALEECTKV
PESQQRVAACYLNLIGQIRMLYLSYCSSHPSAVCVLTDHSEELGTFMESQGASTPGILTL
TTSLSKPFMRLDKYPVLLQELERHVEEAHPDYSDILKATVAFKSLVTQCQDLRKRKNLEL
QILSEPVRGWEGDGMKSLGHVAYMSQVHMQNGTNEEKEERYLMMFPSVLVMLSASPRMSG
FIYQGRLPLTGSTVSRQTDDTENGHYAFDITGSMFDRVTVICSNSQELQDWLDHLNTYTK
GGSPVGTIIRNEGGKPLSMVGTPTHQSHLPIFITPSQGNRGPLEPPKTTKPWSLSCLRPA
PPLKPSAALGYKERMSYILKDSGKSPRPIKKFLPKRKTERKPSDDEFLLRKSTAALEEDA
QILKVIESYCTGASLHQNNTVVRKDSVPQVLLPEEEKMMVEEMKNNGQTIIEEKSLVDAV
YALKDEVHELKKESKWIKQCLEDEQKSRKELERVVRKLAKQKNDCAWEDGDH
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaagagcagacggttacgtggctgatatcattaggggtacttaattcaccc
aagaagaacatagctgacccagaggaatttcttaaaacatctctgaaagatggggtcgtc
ctgtgcaaacttatggagcggctcgtgcccggctctgttccaaagtactgtcaggatccg
agaaacgaagccgactgcatcgctaatatcaaggagtttttgagaggatgtacattcttg
aaagtagagggatttgaaccagagtgcctgtacactggagagaactttaacaaagtgctg
accactctgctgggagtcaactttgccacccaagactgtggcactgagaggtcatgtccc
cagtccggcacatccgctcctagtcagtccacctcttcccacacactatcctcatccaag
tccctgcgcagaccatccaaaccagtggagatgtcggagaacggcgggggcgggctgctg
ctggtgaaggcgcgcttccaattcaagcagaataacgaggatgagctgtccttcaacaag
ggagacctgatcggtgtgtcgcgccaggaggagggcggctggtgggagggcacgctcaac
ggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgcgataaacct
gtgtctcctaaagccactcaacttaccaagaactactacagtgtggtggtgcaagacatc
caggagcatgagcgggagtttgtcaaggagctgcagacagtcttgagctcttacctacga
cctctactggcaagcgacaagctgagtgttacagacagtggcattctgggcgctaacctg
gaggagatcctcaccttccagcagggcctggttctggctctggaggagtgtaccaaggtt
ccagagagccagcagcgagtggctgcctgctacctcaacctgattggccagatcaggatg
ctgtacctgtcctactgctccagtcacccttcagctgtctgcgtactcactgaccacagt
gaggagctgggtacgtttatggagagccagggggccagtacgccaggcatcctgaccctg
accaccagcctgagtaaacccttcatgaggctggacaagtaccccgtcctgctgcaggag
ctggagagacacgtggaggaggcccacccggactacagtgacatcttgaaggcaacggtg
gcctttaagagcttggtgacccagtgtcaggacctgcggaagcgtaagaacctagaacta
cagatcctgtcagagccagtgagaggctgggagggagacggaatgaagtctctgggtcac
gtggcctacatgtcccaggtgcacatgcagaatgggaccaatgaggagaaagaggagcgc
tatctcatgatgtttcccagtgtgctcgtcatgctgtctgctagtccgcggatgagcggc
ttcatataccagggaaggctgccactgacgggctccacggtctccagacagacagacgac
acagagaacggccactatgcctttgatatcacagggagcatgtttgatcgtgtcacagtg
atctgcagtaactcccaggaactgcaggactggctggaccatctcaatacctacaccaaa
ggcggaagccctgtgggcaccataatcaggaacgagggggggaaaccgctcagtatggtg
ggcactcccactcaccagtcccacctgcccatcttcatcacccccagccagggcaaccgg
ggaccactggagccccccaagaccaccaaaccctggtccctgagctgcctgcgtcctgcc
ccgcccctcaagccctctgctgcactgggctacaaggagagaatgtcttatatattgaag
gactccggtaaaagtccgaggcccattaagaagttcctcccgaaacgcaaaacggaacga
aaaccttccgacgatgagttcctcctgcggaaaagtacagctgctctggaggaggatgca
cagattctgaaggtgatcgagtcctactgcacaggggccagcctgcatcagaacaacacg
gtggtgaggaaagattctgtccctcaggtcctgctgccggaggaagagaagatgatggtg
gaagagatgaagaacaacggtcagaccatcatagaggagaagagtctggttgatgcggtg
tacgctttaaaggatgaggtccatgaattaaagaaggagagtaagtggatcaagcaatgt
ctggaggatgagcagaagtctcgtaaggagctggagagagtggtcaggaagctggccaag
cagaagaacgactgtgcctgggaggatggagaccactga
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