Oncorhynchus tshawytscha (Chinook salmon): 112220879
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Entry
112220879 CDS
T05605
Name
(RefSeq) proto-oncogene DBL isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112220879
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112220879
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CRAL_TRIO_2
PH
Motif
Other DBs
NCBI-GeneID:
112220879
NCBI-ProteinID:
XP_042158997
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All DBs
Position
LG21:complement(9880894..9904703)
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AA seq
1057 aa
AA seq
DB search
MGPVSLQVETEQEQKPEREMDCYHSLLQAGSQLENTLQQVSVSMSMKEVDGYIEKQVAYL
SGGRGEDSSVIVTLPEYSAFSDIPEESLAKVLTYLTLIPRARQPGVKFIIILDRRLDTWT
SIKTALARIAASFPGNLHLVLVLRPTSFFQRTVTDLGFRFSQEDFMLKMPVVMLSSVTDL
LRYVDENQLTSEFGGTLDYCHSDWIVLRTAIESFAVTVKDIAQMLQAFGTELAETKLPAE
GTAIMRLLSTHTDKYRKLKEAIRSVSKEGRHLLASLEASGREEDSLWDVRLDWETVQRLL
AQLRGMESAFDGFFEKHHLKLQQYLQLLRYEHRFQEMELSLEHLASQEREMSSSGEKLTQ
TEQTLRDLDILEAHAQEEMVSAQIIILHGHQLAASHHYAMALILQRGNELRHRCDTLSNA
LRVKRAHLSRAHRLLLRLGQAQSWCDDGAYLLAQQLVDKFQSKEGAQAALKDMDRFLEGA
PSLLSSGPDLLAVEFESVLTPEIQVQIGETFEKHTVVQEMIHNRQVCLRKLADKHVRPIQ
LVAPRAESPPRSKSPLFSPKHGVDGLKFSFDLSLPGKRTSRKSPASRKIEVMHDYQENRS
SLLSSLEGEDSPDLLKRHVMRELIETERVYVEELLSVLLGYRGEMENPALAGLLPPILRS
KRNVLFGNMPEIYNFHSRVFLHDLEGCLETPEGVGACFLERKENFKVYECYCQNKPRSES
LWRQYSDCAFFQECQKKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSAGGCEGTSELQ
AALAAMLHLLKSVNDSMHQIAITGYQGELCDLGRVLMQGSFSVWISHKKGPTRMKELARF
KPTQRHLFLYERALLFCKCREEHGEGADKTPSYSFKHCLKMSAVGITENVKGDVKKFEIW
YSGREEVYAVQAPTVEVKTAWLGELRRILTNQQKHLKDERCVDIQMPDHIRRSPPMSESK
QQRASFSSEDTVREEQSRPTVPLPKSPAQPTQRARHASHNGHLSGSGGVGWRSGPLSPVR
HRGGGHCSAGAMGSPRHQYNHSHLLHTVWPRSSPTAF
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagtttcactgcaggtggagactgaacaggagcagaagccagagagagaaatg
gattgctaccatagtcttctacaggctggctctcagctggagaacacactgcagcaagtg
tcagtctctatgagtatgaaggaggtggatggctacattgagaagcaggtggcctacctg
tcaggggggcgtggtgaggactcaagcgtgatcgtgaccctcccagaatactcggctttc
agcgacattccggaggaatctttagccaaagtcttaacatacctcaccctcatacctcga
gcaagacagccaggtgtaaaattcatcatcattttagacagaagactggatacatggacc
tctatcaaaacagcacttgcccgaattgcggcctccttccctgggaacctccacctggtg
ctggtgctgagacccaccagcttcttccagcgcaccgtcacagacctgggcttccgtttc
agtcaggaggacttcatgctcaagatgccagtggtgatgctgagctctgtgacagaccta
ctgagatatgttgatgagaaccaactgacctctgagtttggtggaaccctggactactgc
cacagtgactggatcgttctaagaacagccatagagagctttgcggtgacagttaaggac
atagctcagatgctgcaggcgtttggcacagagctggctgagaccaaactgccagctgag
ggaaccgccatcatgcgcctcctctcaacccacactgacaagtacaggaaactcaaggaa
gcgatacggtcagtatcaaaggagggtcgtcacctgctggctagcctggaggcctcgggg
agagaggaggattcactttgggatgtcaggctggactgggagactgtgcagaggctacta
gctcagctgaggggcatggagtcagcctttgacggcttctttgagaagcatcatctaaaa
ctgcaacagtacttacagctgctcagatacgaacatcgcttccaggagatggagttgtct
ctggagcatctggcgtcccaggagagagagatgtcgtcgtcaggggagaagctgactcag
acagagcagacactcagagacctggacatcctggaggctcacgcacaggaggagatggtc
agtgcccagatcatcattctccatgggcaccagctggcagccagtcaccactatgccatg
gccctgatcttgcagcgcggcaacgagctacgtcaccgctgtgacacgctcagtaatgct
ctgagagtgaaacgcgcacacctctcccgggcccaccggctgctgctacgcctcggccag
gcccagagttggtgtgacgatggggcctacttgttggctcagcagctggtggataagttc
cagtctaaggagggggcccaggctgctttgaaggacatggatagattcctggagggggct
ccgtctcttctcagctcaggacctgacctcctggctgtggagtttgagtctgtcctcacc
ccagagatacaggtccagataggggaaacatttgagaagcacacggtggtgcaggagatg
atccacaacaggcaggtctgtctgaggaagctggctgataaacacgtccgtcccatccaa
ctagtggcccccagggcggagagcccgccccgctccaagtccccactcttttcccccaaa
catggtgtcgacggtttgaagttctccttcgatctgtcactccctgggaagaggacgtcc
cggaaaagccccgcctccagaaagatcgaggtgatgcatgactaccaggagaataggagc
tccctgctctccagcctggaaggagaggacagcccagaccttctcaaacgtcacgtgatg
agggagctgattgagacagagagggtctatgtggaggagctgctgtcagtgctgctgggt
tacaggggagagatggagaacccggccctcgcggggctcttgccccccatcctgcgcagt
aaaaggaacgtcctgtttggcaacatgcctgagatctacaacttccacagcagggtgttc
ctccatgacctggagggctgcctagagaccccagagggagtaggggcctgttttctggag
cggaaggagaatttcaaggtgtatgagtgctactgtcagaataagcctcgctcagagtca
ctatggaggcagtactcggactgtgcctttttccaggagtgtcagaagaagctggagcac
aaacttggtctggactcttacctgctgaaaccagtacaacgcctcaccaaataccagcta
ctactgaaggagctactgaagtacagtgcaggaggctgtgaggggacctccgaactacag
gcggcgctagcagccatgctccacctcctcaagtcagtcaatgactccatgcatcagata
gccatcacaggctaccagggagagttgtgtgacctgggccgggtgctgatgcagggctcc
ttcagtgtgtggatcagccataagaaaggccccacccgtatgaaggagctggcccgcttc
aagcccacgcagagacacctgttcctgtatgagagagccctgcttttctgcaagtgcagg
gaggagcatggagagggagcagacaagactccctcctacagcttcaagcactgtctgaag
atgagtgcggtggggattacagagaacgtcaagggagatgtgaagaagtttgagatctgg
tacagtggcagggaggaggtgtacgccgttcaggctcccacagtggaggttaagacagct
tggctcggggagctgcggaggatcctcaccaaccagcagaaacacctcaaagatgagcgt
tgtgtcgacatccagatgccagaccacatccgacggtccccgcccatgtctgagagcaaa
cagcagagggcgtcgttcagctcagaggacacagtcagggaggagcagtccagacccaca
gtccctctccccaaatcaccagcgcaaccgacacagcgggcccggcacgcctcacacaat
ggacatctgtctgggtctggaggagtggggtggaggtcaggacccctctcaccagtcaga
caccgaggaggaggacactgctcagctggtgcgatgggttctccacgacaccagtacaac
cactctcacttactgcacaccgtgtggcctcgttcctcacccacagccttttag
DBGET
integrated database retrieval system
