Oncorhynchus tshawytscha (Chinook salmon): 112220902
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Entry
112220902 CDS
T05605
Name
(RefSeq) neuronal PAS domain-containing protein 4A-like
KO
K26457
neuronal PAS domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112220902
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112220902
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
Motif
Other DBs
NCBI-GeneID:
112220902
NCBI-ProteinID:
XP_024238632
UniProt:
A0A8C8CJH0
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Position
LG21:complement(10669207..10675399)
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AA seq
912 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISDADKARLSYLHIMSLASMYTRKSVFFSQES
GSAGSLEESARFLSFHELSELVQELPGFLLLLTGEGKLLYLSDSVSEHLGHSMVDLVAQG
DSVYDIIDPTDHFIMRTNLAPPTSPDTDRLFRCRFNTSKSVRRQSAGNKLVLIRARCLSP
PSSSSTPSSYWTSNPVWMCFCSPLEAIPTRFGPGGDQVPALIPPAAENNFFLASFQSQHS
RDMRLQNAQDSVSVYLGLDVSALRSRSWYSLLHPQDLSHASAQHCSLLREGGEGRSEMVV
RVESADQSWVWLYMVLQLEAGDSPISSNNYILSEAEGWSVRQQLSTEQTQLTLVLSTSTS
RQDSLSLSSPDQVFTPSSSGLSAQSFDFSMTVSSVGSSDETGGATTEPMQVEGDPRSSIS
SIEEESFFQQQQMPAPVQSPSAASSPTPVTVATVADLDFLTQNILLPPSFQLEPPLPAIP
LPLPPAPTSQEQQTKEFVCTPPYTPQLGSGSFLFGEPLFSFDPTGTTTPPPSTTTATATT
SIATSLSPSAPPTTASSPAPPSSLCLTGPSTDLFFPADPCSGSLYEKLPPTPDSPGDGDC
TVMTLPEVRGPLYVDVPLGSLPYPLEGLLTPEASPGKQPCLSFFSLEREREKERAEISLL
AQHISSLAEGFYLDPLLSKLSPPSMSPSSSPPSPSLSPSLDTAGVDSSHMLGEFYPVKAW
RGLDFPIFHDDESLFEESILEALLQDFSTPPPLSPNPPSPPNPVCWHSPSHFEGVSHFCS
VQSAHCNPTAGCGVTLAGESGAMAEVEGLVEEPMEIEVASSPLSSCSSIPASPPLRLTAS
PTSAPSTPVDHSTPAVPCAQSLLEELAALEPMFGAGASIAPGLGQQPELYQLQCHQPPQC
FHKDGSGSVPPF
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgatcaacgaagggagcgtcaaaggctcggagggaccaaatcaacgcggagatt
cggaacctgaaggacttgcttcctatctccgatgcggacaaggcacgactctcataccta
catatcatgtcccttgccagcatgtacaccaggaaatcggttttcttctctcaagaatcg
ggatctgctggcagtctcgaggaaagcgcgaggttcctgtctttccacgagctgtcagag
ctggtgcaggagctacctgggtttctgctcctgttgaccggggaaggcaagctgctctac
ctgtcagacagcgtctccgagcacctcggccactccatggtggatttggttgcccagggt
gacagtgtgtatgatatcattgaccctactgaccacttcatcatgaggaccaacctggcc
cctcctacgtcacctgacacagatcgtctattccgttgtcgtttcaacacttccaagtcg
gtgcgcaggcagagtgccgggaacaagctggttctgatccgggcgcgctgcctgtcccct
ccctcctcctcttccacccctagctcctactggacatccaaccctgtttggatgtgcttc
tgttcccctctggaggccatccccacccgctttggccctgggggggaccaagttcctgct
cttatccctcctgctgctgagaacaacttcttcctagcctcgttccagtctcaacacagc
cgagacatgaggctccagaatgcacaggacagtgtcagtgtttacctaggtctcgatgtg
tcagccctgaggtctcgctcctggtacagcctcctccacccacaggacctgtcacacgcc
tctgctcagcactgcagcctgttgagagaaggaggagaaggtagatctgagatggtggta
cgggtggagtctgcagaccagtcctgggtctggctttacatggtactgcagctggaggca
ggagacagccccatcagcagcaacaactacatacttagtgaagcggaggggtggtcagtg
agacagcagctgagcacagagcagacccagctgaccctggtactgagtaccagtacctcc
cgccaggacagcttgagcctgtccagcccagaccaagtcttcacccccagcagcagtggc
ctctcagcccagtcctttgacttcagcatgactgtgtcgagtgtgggctcctccgatgag
acagggggtgccaccactgaacccatgcaagtggagggtgaccctcgctccagtatttcc
tctattgaggaggagagcttcttccagcagcagcagatgcctgcccctgtccaaagccca
tccgctgcctcctcccccaccccggttaccgttgccacggtagcagatctggacttcctc
actcagaacattctcttgcccccctccttccagctcgaacctccgctgcctgccattccc
ctgcccctacccccagcgcccacctctcaggagcagcagaccaaagagtttgtgtgcacg
cccccctacacaccccagctgggcagtggcagcttcctgttcggcgagcccctctttagc
ttcgaccccactggcaccaccacaccccctccctccaccaccacagctacagccaccacc
tccattgccacctccctctccccctctgccccacccaccacagcctccagtcctgctccc
ccctcctccctgtgcctcactggcccctccaccgacctgttcttccctgctgatccctgc
agtggctctctctatgagaagctaccccccacccctgacagccctggggatggggactgc
acagtgatgaccttgcctgaggttcggggacccctgtatgttgatgtccctttagggtcc
cttccctaccccctcgagggcctcctcaccccagaggcctcccccggtaaacagccctgt
ctctctttcttctccctggagagagagagggagaaggagagagcagagatctccctctta
gctcagcacatcagctccttagcagagggattctacctggatcctctcttatccaagcta
tcccctccttccatgtccccctcctcctcccctccctccccctccctctccccatcccta
gacaccgctggtgttgactctagccacatgctgggagagttttacccggttaaagcgtgg
agaggcctggacttccccatattccatgatgatgaatctctgtttgaagagagcatctta
gaagcccttctccaggacttctccacccctccgcccctctcccccaacccgccctctccc
cccaacccagtgtgctggcactcaccctcccactttgagggggtcagccacttctgtagc
gtccaatcggcgcactgtaaccccacggccgggtgcggggtgacgttggccggcgagtcc
ggggcgatggcagaagtggaggggctggtggaggagcctatggagattgaggtggcgtca
tcacctctgtcctcctgttcctccatcccagcatcccctcccctgcgactcactgcctcc
cccacctccgctccctccacgcctgtcgaccactctacacccgccgtgccttgcgctcag
tccctcctggaggagctggccgccctggaacccatgtttggggcaggtgcctcgatcgcc
cccggcttgggtcaacaacctgagttgtatcaactccagtgtcaccagccgccacagtgc
ttccacaaagatgggagtggaagtgttcccccgttctaa
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