Oncorhynchus tshawytscha (Chinook salmon): 112220937
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Entry
112220937 CDS
T05605
Symbol
nocta
Name
(RefSeq) nocturnin isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112220937 (nocta)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
112220937 (nocta)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112220937 (nocta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112220937
NCBI-ProteinID:
XP_024238694
UniProt:
A0AAZ3QVJ5
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All DBs
Position
LG21:complement(11207143..11220097)
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AA seq
470 aa
AA seq
DB search
MYPARRCSFLHRDLAALCLSSLGPAAKKQTSPKKLSLPAPRHCHTGGEGGKPQVKSRGSS
PASASSIPVCLMGSSSSSRLFGTLAQTLNSAPLAQQDYDPEHQDSDQDPEGLEQADPDQL
LRECEEILQNRPARPHRDLVYPVDPKRQHQYRNNEQQQTPSIRVMTWNILAQALGEGKDG
FVQCPLDALNWAERKYLILEEILTYRPDILCLQEVDHYYDTFQPILASLGYHSTFLPKPW
SPCLEVAINNGPDGCALFYRRARFSLLHTSHLRLSAMMLPTNQVAIVQMLRCRETGQRLC
VAVTHLKARSGWERLRGAQGADLLQSLKAITSRAAGSDPVSRGPGGGSGTEGVPLIVCGD
FNAEPSEDVYRRFISSPLGLDSAYKLLSADGQTEPAYTTWKIRPSGESCSTLDYIWYSHG
AFTVDTLLDIPTEEQIGPDRLPSYHYPSDHLSLLCDVSFREPRDQPHRLM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtatccggctcgtcggtgttcgttccttcaccgagacttggcagcgttgtgtctctcc
tccctggggccggcagctaagaaacagacatccccgaagaaattatccctcccggctcca
cggcactgtcacaccggaggagaaggcggcaagccacaggtgaaatcacgcggctcatcg
cccgcgtcagcgagctctataccagtgtgtctgatgggcagcagtagcagcagcaggctg
tttggtaccctggcccagaccctgaacagtgctccactggcccagcaggactacgaccca
gagcaccaggactcagaccaggacccggagggcctggagcaggccgacccagaccagctg
ctcagggagtgcgaggagatcctccagaaccggccggcccggccacacagggacctggtc
taccctgtagaccctaaacgccagcatcaatacaggaacaatgagcaacagcaaacacca
tctatacgggtcatgacatggaacatcctagctcaagctctaggggagggtaaggatggc
tttgtacaatgtcctctggatgctctgaactgggctgagaggaagtacctgatcctggaa
gagatcctcacctaccgccctgacatcctgtgtctccaggaagtggaccactactacgac
accttccagcccatcttggccagcctgggctaccacagcacattccttcccaagccctgg
tccccctgtctggaagtggccatcaacaacggccctgatggctgtgcgctcttctaccgc
cgtgcccgcttcagcctcctccacacctcccacctgcgcctctctgccatgatgctgcct
accaatcaggtggccatcgtgcagatgctgcgttgccgggagacgggccagaggctgtgc
gtggctgtgacccacctgaaggcgcggagtggctgggagaggctgaggggggcccaaggg
gctgacctgctgcagagcctaaaggctatcacctcgagggcggctgggtcagacccagtc
agtaggggacctgggggagggagtgggacagagggggtgcctctgatagtgtgtggggac
tttaacgctgagccctcagaggacgtgtacaggcgttttatctcctcccccctgggtctg
gactccgcctataagctgctgagtgcagatgggcagacggagccggcctacactacctgg
aagatccgtccctcaggggagagctgcagtaccctggactacatctggtactctcacggt
gctttcactgtggacaccctgctggacatacccactgaggaacagataggacctgaccgc
ctgccctcctaccactacccctccgaccacctctcactgctctgtgatgtcagcttcagg
gagccacgggatcaacctcataggctgatgtag
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