Oncorhynchus tshawytscha (Chinook salmon): 112221031
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Entry
112221031 CDS
T05605
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112221031
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112221031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
otw03110
]
112221031
04131 Membrane trafficking [BR:
otw04131
]
112221031
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112221031
Chaperones and folding catalysts [BR:
otw03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
112221031
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112221031
Autophagy
ER-phagy
Other ER-phagy associated proteins
112221031
Lectins [BR:
otw04091
]
L-type lectins
112221031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Spore_coat_CotO
DDHD
Piezo_TM1-24
MFS_Mycoplasma
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
112221031
NCBI-ProteinID:
XP_024238864
LinkDB
All DBs
Position
LG21:complement(15794786..15817593)
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AA seq
631 aa
AA seq
DB search
MELNVRCVVLLAVGLCSTLLLTTVAAHQEEEPIMELAEDMGVEDELEDLGLGEELLDGEV
EPEDADTPPGPPPAPKVTYKAPEPMGEHFFAESFDRGTLDSWVLSKAKKEDIDEDIAKYD
GKWEVEDMKDSKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDCG
GAYVKLLSQTPDLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKK
PDADLRTYYTDKKTHLYTLVVNPDNSFEVLVDQTVVNSGNLLTDMTPPINPAAEIEDPDD
HKPEDWDERPKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDQPEYTSDPDAVKPED
WDEDMDGEWEAPQIPNALCETAPGCGAWQRPMIDNPNYKGKWKAPMIDNPNYQGVWKPRK
IANPDFFEDLHPFRMTPFNAVGLELWSMSSDIFFDNFFITNERHTAERWANDGWGLKKAA
EGAAEPGLVNQMMTAADERPWLWVVYVLTVAVPLILIIVFFCTGKKAVAPAAADYKKTDE
PQPDVKEEEEEKAEEDQVKEEKSQPAAAGKKSDAEDSPAEKEGEGEGEEEEEEEEEEAAV
NEEEEEEAATDQKQEDDVLRRSPRNTKGRKD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaatgtgaggtgtgttgtgctgctggccgtgggcctgtgctccaccctgcta
ctgaccacagtggccgcccaccaggaggaggagcctatcatggagctggcggaagacatg
ggcgtggaggacgagctggaggacctgggccttggggaggagcttctggatggggaggtg
gagccagaggatgcagacacaccaccgggaccgcctccagcccctaaagtgacctacaaa
gctcccgagcccatgggggaacacttcttcgccgagtcctttgacagggggaccctagac
agctgggtcctctcaaaggccaagaaggaggacattgatgaggatatcgccaagtatgat
ggtaaatgggaggtggaggacatgaaagacagcaagctgcctggagacaaaggcctggtc
ctcaagtcacgtgctaagcaccacgccatctcagcccagctcctcagacccttcatcttc
gacaccaaacccctcatcgtccagtatgaggtcaacttccagcaggggatcgactgtggc
ggtgcctacgtcaaactgctctcccagaccccagaccttaacctggatgagtttgttgac
aagactccctacaccatcatgttcggaccagacaagtgtggcgaggactacaagctgcac
ttcatattccgccacaagaaccccaagactggcgagtacgaggagaagcacgccaagaag
cctgacgcagacctgcgcacctactacactgacaagaagacccacctttacacactggtg
gtgaacccagacaacagctttgaggtgctggtagaccagacagtggtgaacagtggtaac
ctgctgacagacatgaccccacccatcaatcctgccgcagagatcgaggaccccgacgac
cacaagccagaggactgggacgagaggcccaagatccaggaccctgacgcagtcaaacct
gaggactgggatgaggatgcaccaaaacagatcccagatgaggatgcagtgaagccagac
ggctggctggatgatcagccagagtacaccagtgaccccgacgcagtcaagcccgaggac
tgggatgaggacatggatggcgagtgggaggcccctcagatcccgaacgccctctgtgag
accgcgcccggctgcggtgcatggcaacggcccatgattgacaaccccaactacaagggc
aagtggaaggccccaatgatcgacaatcccaactaccagggtgtgtggaagcccaggaag
attgccaatccggacttcttcgaggacctccatcccttcaggatgacccccttcaatgcc
gtgggcctggagctgtggtccatgtccagcgacatcttcttcgataacttcttcatcacc
aacgagcggcacacggccgagcgctgggccaatgacggctggggtttgaagaaagctgct
gagggagccgctgagcccgggctggtaaaccaaatgatgactgcagcagacgagcgtccc
tggttgtgggtggtctatgtgctgactgtggccgtgcccctcatcctcatcattgtcttc
ttctgcaccgggaagaaggcggtggctccagctgcagctgactacaagaagacagacgag
cctcagccagacgtgaaggaggaggaagaggagaaggctgaggaggaccaagtcaaggag
gagaagagccagccagcagcagcggggaagaagagtgatgcagaggacagccctgcagag
aaggaaggggaaggggaaggggaagaggaggaggaggaggaggaagaagaggcagcagtg
aatgaggaagaggaagaggaggcggcaactgatcagaaacaagaagatgatgtcctcagg
aggtcccctagaaacacaaaagggagaaaggactga
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