Oncorhynchus tshawytscha (Chinook salmon): 112221038
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Entry
112221038 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221038
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112221038
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
Ig_2
V-set
LRR_9
LRRNT
LRR_Zer-1
Big_6
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
112221038
NCBI-ProteinID:
XP_024238869
UniProt:
A0AAZ3R251
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All DBs
Position
LG21:complement(16275256..16578614)
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AA seq
614 aa
AA seq
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MVDCMSKVMLHTALSCWQPFLGLALVAVFVGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSL
KSNRIKLIPLGVFTGLSNLTRLDVSDNKIVILLDYMFQDLHNLKFLEVGDNDLVYISHRA
FSGLLSLQTLTLERCNLTVVPTEALSHLHNLVRLHLRYLSISTLQAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHSLNLTTLFITNTNLSTFPYQALKHLHYLTHLNLSFNRIRHIEAGM
LFELVRLRELHLVGAQLSTIELYAFQGLWWLKVLNVSHNHLNTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQKRHSIFFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQSAKLHCSAEGIPRPVVSWLSPRRRLLTNKSYGRVKVHNNGTLEIKV
AEVQDGGVYLCMATNTAGNDSLMASLAVKSLGSLYANRTQYYTDPSNATTNGTSNVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSVDGGA
EGQAGPHRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactgtatgagcaaagtcatgctgcacacagccctctcatgctggcaaccgttc
ctgggactggctctagtggccgtctttgtgggttctgccctgggatgtcccgcccgctgt
gactgctcagcccagagcaagtcggtcctgtgccaccgcaaacgcctaccgagcatacca
gacggcatccccatcgagaccaggatcctggacctgagcaagaacaagctgcaggccgtc
aacccggacgactttgccccctaccctggactagaggatctggacctcagtgggaacatt
atcagctatgtggagccgggggccttcaaccctctgtacagcatgcactctctcagtctc
aaaagtaaccgcatcaagcttattcccctgggggtcttcacaggcttgtccaacctcaca
cggctggatgtcagcgacaacaagatcgtcatcctgctggactacatgttccaggacttg
cacaacctgaagttcctggaggtgggtgacaatgacctggtgtacatctcccaccgggcc
ttcagtggactgctgagcctacagacactaaccctggagagatgcaacctgacggtggtg
cccactgaggccctgtcccatctgcacaacttggtcagacttcacctccgatacctcagc
atcagcacattgcaagcatactccttcaagaagcttttccggctgcgccacctggagatt
gacagctggacctcgctggacagtgtgcctgccaacacactacacagcctcaacctgacc
acgcttttcatcaccaacactaacctgtccaccttcccataccaggccctaaagcacctg
cactacctaacacacctcaacctgtccttcaaccgcatcagacacatcgaggcgggaatg
ctgtttgagttggtgcgcctgagggaacttcatctagttggggcccagttgtcgaccatt
gaactgtacgcatttcagggcctctggtggctcaaagtcctcaacgtctcccacaaccat
ttgaacaccctggagaagggtgtcttccaagcccctgaggctctggaggtcctcttgatc
gacgacaaccccctggtgtgcgactgtcgcctcatgtggatcctgcagaaaaggcactcc
atcttctttggcgactcgcagccagagtgcagcacccctgagggtatccgtggcaggcct
ttcagggaattcaaggagaccctgctatcctattacgtgacatgcaccaagccaaaaatc
cgggagaacaagacacagacgatagcagtggacgagggccagtcagcgaaactacactgc
agtgctgaaggcatccccaggccagtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagctacggtagagtcaaagtccacaacaatgggacgctggagatcaaggtg
gccgaggtgcaggacggtggcgtgtacctttgcatggctaccaacacggcgggtaacgac
tcattgatggcctccctagcagtgaaaagtctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaatgccactaccaatgggactagcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggatgtttcacattcctgggggtggtc
ttgttctgctttctgctactgttcgtttggagccggggcaagggaaagcataaaaacaac
atagatattgaatatgtccctcggtccaagtctaatggcacctctgtagatggaggggca
gagggacaagctggacctcatcgctttaacatgaaaatgatctaa
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