Oncorhynchus tshawytscha (Chinook salmon): 112221070
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Entry
112221070 CDS
T05605
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112221070
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112221070
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
112221070
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
112221070
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112221070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
DSPc
GUN4_N
PTP-NADK
Y_phosphatase3
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
112221070
NCBI-ProteinID:
XP_024238970
UniProt:
A0A8C8CXU0
LinkDB
All DBs
Position
LG01:complement(13947338..14042656)
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AA seq
1511 aa
AA seq
DB search
METAASRCFLLLTQLLLVCQLAEPVQGYGHRAQAAQRKFADDIDWSYAGTLNQNNWANKY
SSCSNARQSPINIEEELTQVKVQFQKLEFEGWEEAMSDRTTIKNDGKTVAVNPEGDFYLS
GGGLRGRFKVGRITFHWGLCKASTEGSEHSLSGVKYPLEMQIYCYEALHFESIDQAIKDG
GRITALSVLLETGIEDNDNYMAIIDGINSVSRFGKSGMVGPFSLRGLLPNSTDKYFTYNG
SLTTPPCTDTVEWIVFKNTVAISDTQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQQFM
GQVFSSYTGTEEVLTPICSSEPENVQADPHNLTSLLVMWERPRAVYDAGIEKYSVTYRLA
QGEDSATFQYLTDGDQDVGAMLQDLKANTSYVVQVVAVCTNGLYGHVSEQLSVDMPFEDP
EVTPYPDSTEFEGEEDYGPWAKPGEELDNDMDWTTQSTTRTRPTSTTGPPSLPLPAIRTT
TPFVQRRTPTPGTPSRTTQPNQAQTSTEQSERYRSTTRAPAEGAVSAGSRGRGRTQKYTT
TVTTPQSRTDVINTSSTKTEKGRGVAYPVTVPSGKGSGVSIAILLPESRTMATSASSLSQ
GEPPWPTSPSMPLFSSTASSFAGALLQTTQPVFNATPSSSKDHWVSALRTSAPSSPYSAS
PLTPTLPPELQTVDSSASGSTLFGEAQKELDEEWDRVQSSASGEGALPYIPTFTPSLTSE
ATATPNIDTEELSSSFYFESENGSAVTNDTAGSTATVSGVTVAAPWSLGVEVESGSGQGE
SLYDNETSSDFTITERTERDSEEEEEPVAEASNSSHESRVGLARERERRAMVPLAVISTL
TFLGLIVLVGILIYWRKCFQIAHFYIEDNTSPRVISVSPTSMRTDTDKQEALPVKQFVKH
VTELHHTNAFSREFEILKECYEEVQVCPVDLGITTDGSNHPDNKNKNRYVNILAYDHSRV
RLSTQADKDGKSGDYINANYVDGFNKSRAYIAAQGPLKSSTVDFWRMVWEQNVGVIIMIT
NLVEKGRRKCDQYWPLDSQEEYGGFLVMVKSNKVLAHYTQRTFTLRNTKVKKVSLKGRIN
ERTVTQYHYTQWPDMGVPEYTLPVLTFVQKSSKARTDDMGPIVVHCSAGVGRTGTYIVLD
SMLKQIKEEGTVNIMGFLKHIRTQRNYLVQTEEQYVFIHDALVEAILSKETEVPSSRIHS
YVNDLLTPGPSGRTQLEKQFKLISSSNAIQCDYSSALKECNRENRNSSLIPDERSRVCLS
TVAGETTSDYINASYLTGYRQSTEFIVTQNPLAGTVTEFWRMIWDHNAQVIVTLPGTPSL
AEGEEPYVYWPRKEQPISYEVFTVTLQSENHMCLANEEMLVVQHYVLEATQDDYVLEVRH
YRAPHWPNPDSPISSTFELLSLVKEESSSKEGPTVVHDQVGGVTAGTFCALSTLVRQLEA
ESSVDVYQVAKMFNLMRPRTFTDVEQYQFLYTAMLSLVGTQEDERMLQSSDNNGTVPGDT
ASTAESLESLV
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggaaacggctgcttcaagatgtttcctattgctcactcagctcttgctcgtctgtcaa
ttagctgaacctgtgcaaggatacggacaccgggcccaggctgcccagcgcaaattcgct
gatgacatcgactggtcctatgcggggactctaaaccaaaacaactgggccaacaagtac
tcatcatgcagcaatgctagacagtcgcccatcaacatcgaggaggagctgacacaggtc
aaagttcagttccaaaagctggagtttgagggctgggaggaggcgatgtctgataggacc
accatcaagaatgacggcaagaccgtggcggtgaacccagagggggacttctatttgagt
ggaggggggctgaggggcaggtttaaggtggggagaatcaccttccactggggcctctgt
aaggcttccacagagggctccgagcacagtctcagtggggtcaagtaccccctggagatg
cagatctactgttatgaagcgcttcactttgagtccatagaccaggccatcaaggacggg
ggcaggatcacagctctctctgtgctgttagagacaggcattgaagacaatgacaactac
atggccattatcgacggaatcaacagtgtcagccgattcggtaagagtgggatggtgggt
cccttctctctccgtggcctcctgcccaactcaacagataagtacttcacctacaatggc
tccctcaccaccccaccctgcactgataccgtggagtggattgtcttcaagaacactgtg
gccatctccgacacgcagctggaggtgttctgtgaggtgatgaccatgcagcaggcaggc
tatgtgatgctgatggactacctgcagaacaacttcagggagcagcagcagcagttcatg
ggacaggtcttctcctcctataccggcacggaggaggtcctcactcccatctgtagttca
gagccggagaatgtgcaggcggacccccataacctgaccagcctgctggtgatgtgggag
cggccgagggcggtgtacgacgccgggatagagaagtactcagtcacctacaggctggcc
caaggagaggactctgcaaccttccaatacctgactgacggagaccaggatgtgggggcc
atgctgcaggacctgaaagccaatactagctatgtggtgcaggtggtggccgtgtgcacc
aacggtctgtacggtcacgtgagcgagcagctgtccgtcgacatgcccttcgaagacccc
gaggtaacaccttatccagattctactgagtttgaaggggaagaggactatggaccctgg
gctaaaccaggtgaagaactggacaatgacatggactggacaacccaaagcactacgaga
accaggcccacttcaaccactggcccacccagcctccccttgcctgctatcagaaccacc
accccatttgtccagaggagaacccccacaccaggcactccatccaggaccactcaaccc
aaccaagcacagacttccacagagcagagtgagaggtatcgcagtacaaccagagcacca
gcagagggtgccgtctcagcaggcagcagaggcaggggaagaacccagaagtataccact
acagtgaccactccgcaatcacgcactgatgtcatcaacacttcatcaaccaagaccgag
aagggcagaggggtggcgtatcctgtgaccgtcccaagcggaaaaggcagtggtgtttcc
atagccattctgctcccggaaagccggaccatggccacttccgcctcctccctctctcag
ggagaaccaccatggcctacaagtcccagcatgcccttgttttcatccactgcctcctcc
ttcgccggggcactcttgcagaccacgcagccggtgttcaacgccacaccgtccagctcc
aaggaccactgggtctcggccctccgaacctcggccccctcctctccctactcggcctcc
cccctcacccccaccctcccccctgagctgcagacggtagacagtagtgcctctggctcg
accctgtttggagaagcccagaaggagctagatgaggagtgggacagggttcagagttca
gcctcgggggagggcgcgctcccttacatccccaccttcaccccctcactcacctctgaa
gccaccgccactcccaacatcgacacagaagaactctcctcatcgttctactttgagagc
gagaacggcagtgccgtcaccaacgatacagcgggcagcacggcaacagtatctggggtg
accgtggcggcgccctggtcgctaggtgttgaggtggagagtggctcggggcagggcgag
agcctgtacgacaacgagacgtcatcagacttcactatcaccgagcgcacagagagagac
tctgaggaggaggaggagccagttgcagaggccagtaacagcagccatgagtccagggtg
ggtctggccagggagagagagaggagggccatggtccctctggcagtgatctccaccctc
accttcctgggactcatcgtcctggtgggaatcctcatctactggaggaagtgtttccag
attgcccatttctacatagaggacaacacatcccccagagtcatatctgtttcacccaca
tccatgcgtacagatacagataaacaagaagcccttccagtgaagcagtttgtcaagcac
gtgacggagctccaccacaccaatgcattctccagagagtttgagatattgaaagagtgt
tatgaggaggtgcaggtgtgcccggtggacctgggtatcaccacagacggctccaaccat
ccagacaacaagaacaagaaccgatacgttaatatcctggcctatgaccacagccgagta
agactctcaacccaggctgacaaagatgggaagagtggagattacattaacgcaaactac
gttgacggtttcaacaagtccagggcctacatcgcagcccagggcccactcaagtccagc
accgtggacttctggaggatggtgtgggaacagaacgtgggcgtcatcatcatgattacc
aacttggtagagaagggacggaggaagtgtgaccagtactggcccctggatagccaggaa
gagtacggtggtttcctggtgatggtgaagagcaataaggttctggcccactacacccag
agaaccttcaccctcaggaacaccaaggtcaaaaaggtttctctgaaggggcggattaac
gagcggaccgtgacacagtaccactacactcagtggccggacatgggcgtgcccgagtac
actctgcccgtgctcaccttcgtccagaagtcctccaaagccaggacagatgacatgggg
cctatcgtagtgcactgcagtgcaggggttggcaggactggaacctacatagtgttggat
agcatgctgaagcagatcaaagaagagggcacggtcaacatcatgggcttcctcaaacac
atccgcacacagaggaactacctggtacagacagaggagcagtatgtgttcattcacgat
gctctagtggaggccatcttgagcaaggagacggaggttccctccagtcgcatccacagc
tacgtcaacgacctcctgaccccagggccctccggaaggacacagctagagaaacagttt
aagctgatatcctcgtccaatgccatacagtgcgactactcttcagccctgaaagagtgt
aacagagagaacagaaactcctctttaatacccgatgaaaggtcacgggtttgtctgtcc
acagtggctggagaaactacatcagactacatcaacgcctcatacctcacggggtaccgg
cagagcactgagttcatcgtgacccaaaacccgctggccggcacagtgacagaattctgg
aggatgatctgggatcacaacgctcaggtcatagtcacactgccgggaacaccaagcctg
gcagagggggaggagccatacgtgtactggccccgcaaggagcagccaatcagctatgag
gtgttcacagtgaccctgcagagcgagaaccacatgtgtctggccaacgaggagatgctg
gtggtgcagcactacgtcctggaggctacacaggatgactatgttctggaagtgaggcac
taccgggcgcctcactggcccaacccggacagccccatcagcagcacctttgagctgctc
agtctggtgaaggaggagagctcctccaaggagggccccacggtggtccacgaccaggtt
ggtggtgttactgcgggaaccttctgtgccctgtctactctggtgcgccaactagaggcg
gagagctctgtggacgtgtaccaggtggccaagatgttcaacctcatgaggcccaggacc
ttcactgatgttgagcagtatcagttcctatacacagccatgctgagtctggtgggcaca
caggaggacgagaggatgctccagtcctcagacaacaacggaacagtcccaggggacacc
gccagcacagcagagagccttgagtccctggtgtaa
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integrated database retrieval system
