Oncorhynchus tshawytscha (Chinook salmon): 112221102
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Entry
112221102 CDS
T05605
Symbol
med12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112221102 (med12)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
112221102 (med12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Motif
Other DBs
NCBI-GeneID:
112221102
NCBI-ProteinID:
XP_042159146
LinkDB
All DBs
Position
LG21:complement(22319377..22363487)
Genome browser
AA seq
2183 aa
AA seq
DB search
MMAAFGILSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSA
KNVNFNPSKISSNFSSIIAEKLRYNTFPDTGKRKPQVNQKDNFWLVTARSQSSINNWFTD
LAGTKPLTQLAKKVPIFSKKEEVFGYLAKYTVPVMRSAWMIKMTCAYHAAITETKVKKRH
VIDPCIEWTQIITKYLWEQLQKVAEFYRQSPSQGCGSPLPANPAEVDTAMKQWEYNEKLA
MFMFQDGMLDRHEFLTWVLECFEKVRPGEDELLKLLLPLLLQYSGEFVLSAYLSRRLAYF
CTRRLNLLLSDGSLGPGSGGHPAHSILAQPGNTLPPTPTSQPTGGNQPQTPFTDFYICPQ
HRPLVFGLSCMLQSIVLCCPSALVWHYSLTDSRNKTGSPLDLLPISPSNLPMPGGNSTFT
QQVRAKVREIEEQVKDRGQAVEFRWSFDKCQETTAGFTIGRVLHTLEVLDNHSFEKSDFS
NSLDSLYNRIFGSGQSKDGHEMSPDDDAVVTLLCEWAVCCKRSGRHRAMVVAKLLEKRQA
EIEAERCGESEVVDEKGSVSSGSLSAATLPVFQDVLLQFLDTQAPMLTEAGNESERVEFS
NLVLLFCELIRHDVFSHNIYMCTLISRGDLASDSHLPRPRSPSDEPSDESERKEQDAGSS
VKNEDTGLSELMEIDHNSSANFDEMFSPPTHCESKGSPSPEKPAPEQEGKGACKDKALDP
AFPLVYEQPRHIQYATHFPIPQEESASHECNQRLVVLYGVGKQRDEARHAIKKITKDILK
VLNRKSTAETGGEEGQKRKRTKPEAFPTAEDIFSKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHIQFIFDLMEYSLNISGLIDFAIQLLNELSLVEAELLLKSSSLVGS
YTTGLCLCIVAVLRRYHSCLILNPEQTAQVFDGLRIVVKSGVNPADCSSAERCILAYLYD
LYTSCCHLKSKFGEIFSEFCSKVKNSIYCNIDPSDSNMLWDPVFMMEAIANPSAHNFNHS
MVGKILNDSPANRYSFVCNVLMDVCVDHRDPERVNDIGILCAELTAYCRSLSAEWLGVLK
ALCCSSNNGNCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLVRCVAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQRNPCPQDGAKSDKSSVGIRSSCDRHLLAASQNS
IVVGAVFAVLKAVFMLGDAELKGSGFSHPAALDDIADDDIGSKKSGGRTVSIETASLDVY
AKYVLKSICQQEWVGERCLRSLSEDSSALQDPVLVNIQAQRLLQLICYPHRQLDSEEGDN
PQRQRIKHILQNMDQWTMRQSSLELQLMIKQSTNNELYSLLENIAKATIEVFQKSAEMNS
TNLSGNGSAGAGGSASNSNNPSKKPVLSSSERSGVWLVAPLIAKLPTSVQGHVLKAAGEE
LEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQI
VTNWREDQYQDDCKAKQMMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTV
DMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSE
SLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFEKEGLQVSTKQKISPWDVFEGL
KHSAPLSWGWFGTVRVDRKVTKFEEQQRFLLYHTHLKPKPRSYYLEPLPLPPEDEEPPTP
APQEPEKKMAEPVKPEKSVPAVSSDSTKKKTKKKKTPSTNKTEDYVTRTQGGLPYGTCIP
PDPLMGQQAHPYSRIGYNQQPMGMYAQNQPLPPGGPGLDTPYRPARNPQMGKMMPTRPSY
PGMMPGMQGGMPGMMGMDKQYPMGYKPQPNIPQGQILRQQLQVRLNQSMIGPQMRQMTPN
QQYSSMQPSQNISQGYTTYGSHIGMQPHPSQAGGIVPPSYGNQGFQGSHPGANPAVVDSL
RQRPSGYVHQQAPGYSHTMQNTPRFPHQSIQPAPVMQPLSHMGVHPGMRPNQMLAEQQQQ
QQAQQQQQVQQQQQQVQQQQQQVQQQQQVQQQQQVQQQQQVQQQQQVQQQVQQQVQQQQQ
VQPQQVQQQQQQQQQQQVASAQPPGTQAQNQALGMQQPMFPRQGMQQTQMQQTQQQQQTA
ALVRQLQQQLSNTQPGQNTNSYY
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgctttcgggatcttaagttacgaacaccggcccctgaagcggccacgactc
ggacctccggacgtttatccccaagacccaaagcaaaaagaggatgaattgactgcgttg
aatgtgaagcaaggatttaataatcaaccggctgtgtctggggatgaacatggaagtgct
aaaaatgtcaacttcaatccctcaaagattagttcaaacttcagcagcatcattgcagag
aagttgcgctacaacacatttccagacacaggcaaacggaagcctcaggtcaaccagaag
gacaatttctggctcgttactgccaggtcacagagctctatcaacaactggtttacagac
ttggctgggactaaacccctcacccagctggccaagaaggtgccaatctttagtaaaaag
gaggaggtttttggctacttggccaagtacacagtacctgtgatgcgttcggcatggatg
atcaagatgacctgtgcgtatcacgcggccatcacagaaacaaaagtcaagaagcggcac
gtgattgacccctgcatagaatggactcagatcatcactaagtacctgtgggagcagttg
cagaaggtggccgagttctaccgccagtctcccagccagggctgtggctcccccctcccg
gccaatccggccgaggtggacacggccatgaagcagtgggagtacaacgagaagctggcc
atgttcatgttccaggatggcatgctagatagacacgagttcctgacgtgggtgttggaa
tgcttcgagaaagtccgacctggagaggatgagcttctgaagctgctgctgcccctcctg
ctacagtactcaggggagttcgtgctgtcggcctacctgtctcggagactggcctacttc
tgcacgcgacgcctcaacctgctgctaagcgacgggagcctgggacccggctccgggggg
cacccggcacacagcatcctggcacagccggggaacaccctgccccccacacccacctcc
cagcccacggggggcaaccaaccccagacccccttcacagacttctacatctgccctcaa
cacaggcccttggtgtttgggctcagctgcatgctacagagtatcgtgctgtgctgtccc
agtgccctggtgtggcactactctctgacagacagccggaacaagactggttccccactg
gacttactccccatatccccgtccaacctgcccatgccagggggcaacagcacctttaca
cagcaggtccgtgcaaaggtcagagaaatagaggagcaggtcaaggacagagggcaggct
gtggagttccgctggtcctttgataaatgtcaggagacaactgctggcttcaccattgga
agggtcctacacaccctggaggttctagacaaccacagttttgagaagtcagacttcagc
aactccctggattccctttacaaccgcatcttcggctcgggccagagcaaagacggccac
gagatgtcccctgatgacgatgccgtggtgaccctgctgtgtgagtgggcggtgtgctgc
aagaggtctggccgtcacagggccatggtggtggccaagctgctggagaagagacaggca
gagatcgaagccgagaggtgcggtgagtcggaggtggtggatgagaaaggctcagtttca
tcaggatctctctcggcggccaccctgcctgtgtttcaagacgtgctcctgcagttcctg
gacacccaggcccccatgctcacggaggcaggcaacgagagcgagcgtgtggagttctct
aacctggtgctgctcttctgcgaactcatccgccacgacgtcttctctcacaacatctac
atgtgcacgctcatctcccgcggtgacctggcctctgactctcacctgccccgcccccgt
tcccctagtgatgagccttcagacgaatcagagcgcaaggagcaggatgcaggcagcagc
gtcaagaacgaggacactggtctttccgagttaatggagatcgatcacaactcgagcgct
aattttgatgagatgttttctccccccactcactgtgagtcaaagggcagcccctctccc
gagaagcctgccccagaacaggaagggaagggcgcctgcaaagacaaggccctggatcct
gccttcccattggtgtacgagcaaccccgccacattcaatacgctacccacttccccatc
ccccaggaggagagtgccagtcatgagtgtaaccagcgactggtggtgctctacggcgtg
ggcaagcagcgagatgaagcgaggcacgccatcaagaaaatcaccaaagacatcttgaag
gtgctcaaccgcaaaagcacagcagagaccggaggagaggaaggacagaagaggaagagg
actaagcctgaagccttccccacagcagaggacatcttctccaaattccagcacctctcc
cattttgatcagcaccaggtcacctctcaggtgtccaggaatgttctggaacagatcacc
agctttgccttagggatgtcctatcacctgcccctggtccagcacatccagttcatcttt
gacctcatggagtactcccttaacattagtggcctcatcgactttgccattcagctgctg
aatgagctgagcctggtggaggcagagctactgctcaagtcatccagcctggtgggtagc
tataccacaggtctgtgtctgtgcatcgtggccgtgctgaggaggtaccactcctgcctc
atcctcaacccagagcagacggcacaggtctttgacgggttacgcattgtggtgaagtcg
ggggtgaacccagccgactgctcctcagccgagcgctgcatcctggcctacctgtacgac
ctctatacctcctgctgtcacctaaagagcaagtttggagagatcttcagtgagttctgc
tccaaggtgaagaactccatatactgtaacatcgatccgtctgactccaacatgctgtgg
gaccctgtgttcatgatggaggccatcgccaatccgtcggcccacaatttcaaccacagc
atggtgggtaagatcctcaatgacagccccgccaaccgctacagcttcgtctgcaacgtg
ctcatggacgtgtgcgtggaccacagggaccccgagagggtgaatgacattgggatccta
tgtgcggagctgactgcctactgtcgctctctgagtgctgagtggctgggcgtcctcaaa
gccctctgctgctcctccaacaacggcaactgtggcttcaacgacctcctgtgcaacgtg
gacgtcagcgatctctccttccacgactctctggccaccttcgtagccatcctcattgcc
cgccagtgtcttcttctggaagacctggtccgctgcgtagccatcccctccctcctcaac
gctgcctgcagtgagcaggactctgagcccggagcccgtctgacctgcaggatcctgctg
cacctcttcaagaccccccagcgcaacccctgcccccaggatggagccaagtcagataaa
tcttctgttgggatccggtcgtcgtgtgaccgtcaccttctggctgcctcacagaacagc
atagtggttggagctgtttttgctgtcctaaaggccgtctttatgctgggcgatgcagaa
ctgaagggatcgggattctctcaccctgccgccctcgatgacatcgccgacgacgacatc
ggttccaagaagtcgggcggccgcaccgtctccatagaaacggccagcctggacgtgtac
gccaagtatgtgctgaagagcatctgccaacaggagtgggtgggcgagcgctgtctcagg
tccctgtcggaggacagcagtgccttgcaggacccggtgctggttaacatccaggcccag
cggttgctgcagctcatctgctacccccaccgccagctggacagtgaggagggggacaac
ccccagaggcagcgcatcaaacacatcctccagaacatggaccagtggaccatgagacag
tcatccctggagctgcagcttatgatcaagcagagtactaacaacgagctgtactcctta
ttggagaacatcgccaaggccactatcgaggtgttccagaagtcagcggagatgaactcc
accaacctctcagggaacgggtcagccggcgccggaggttctgcctccaacagcaacaac
ccaagcaagaaaccagtgttgagttcgtctgagcggtctggtgtgtggctggtggcgcca
ctgattgccaagctgcccacctcggtccagggccacgtcctgaaggcggcaggggaggag
ctagagaagggccagcatctggggtcctcctcacgcaaggagagagaccggcagaaacag
aaaagcatgtctctgctgagccagcagcccttcctgtctctggtgctgacctgtctaaaa
ggccaggatgagcagagggagggcctcctcacttccctctacagccaggtgcagcagatt
gtaacgaactggcgggaggaccagtaccaggacgactgcaaggccaagcagatgatgcat
gaggcgctgaagctgcggcttaatctggtgggtgggatgtttgacacggtacaacgcagt
acacagcagaccacggagtgggccgtgctactcctcgacatcattagcagcggtacagtg
gacatgcagtccaacaatgagctcttcaccacggtactagacatgctgagtgtgctaatt
aatggcacgctggctgctgacatgtctagcatctctcagggcagcatggaggagaacaag
agggcttatatgaacctggtcaagaagctccggaaagagctgggtgaccggcagtcagag
agtctggagaaggtgcggcagctgctccctctgcccaagcagacccgtgatgtcatcacg
tgtgaaccacagggctcgcttattgacaccaagggaaacaagatcgctggctttgagaag
gagggtctccaagtgtcgaccaagcagaagatctctccgtgggatgtgttcgagggcctc
aagcactcggcccctctctcctggggctggtttggtacggtgcgcgtggaccgtaaggtg
accaagttcgaggaacagcagcgcttcctcctctaccacacccacctgaagcccaagccg
cgcagttactatctggagcccctccccctgccccctgaggatgaggagccgcccacgccc
gcgccccaggaacccgagaagaagatggcggagccagtgaagccggagaagagcgtccct
gcggtgtcgtccgattcaaccaagaagaagaccaagaagaagaagacaccgtccaccaac
aagactgaggactatgtgacccgtacccagggtggactgccgtatgggacgtgtataccc
ccagaccccctcatgggccagcaggcccacccctacagcaggataggctacaaccaacag
cccatgggcatgtatgcccagaaccagcctctgcctccaggaggccctggtttggacacc
ccgtaccgaccagcccggaaccctcaaatgggcaagatgatgcccacacggcccagctac
ccaggcatgatgcccggcatgcaaggtggcatgccaggcatgatgggcatggacaagcag
tacccgatgggctacaagccccaacccaacattccgcagggtcagattctgcgccagcag
ctacaggtcagactgaaccagagtatgataggaccacagatgaggcagatgacgcctaac
caacaatacagctccatgcagccaagccagaacatctcccagggatataccacgtacggc
tcccacattgggatgcagccacacccctctcaggcgggtggtatagtcccgccatcgtat
gggaaccagggcttccagggcagccacccgggggccaacccggccgtggtggactctctg
aggcagaggcccagcggctatgttcaccagcaggcaccgggctactcacacaccatgcag
aacacaccaaggtttccccaccagtccatccagccagctcccgtcatgcagcccttgagc
cacatgggggtccacccgggcatgagaccaaaccagatgctggccgagcagcagcagcaa
cagcaggcccagcagcaacaacaggttcagcagcagcagcagcaggttcagcagcagcag
cagcaggttcagcagcagcagcaggttcagcagcagcagcaggttcagcagcagcaacag
gttcagcagcagcaacaggttcagcaacaggttcaacagcaggttcaacagcagcaacag
gtccagccccaacaagttcaacaacagcagcagcaacaacaacaacagcaggtagcgtcg
gcccagccccccggtacccaggctcagaaccaggccctgggcatgcagcaacccatgttc
ccacgacaggggatgcagcagactcagatgcagcagactcaacagcagcagcagaccgca
gcactggtcaggcagctccaacaacaactctcaaatacacaacccggacagaacaccaac
tcatattactga
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integrated database retrieval system
