Oncorhynchus tshawytscha (Chinook salmon): 112221155
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Entry
112221155 CDS
T05605
Symbol
ints5
Name
(RefSeq) integrator complex subunit 5
KO
K13142
integrator complex subunit 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112221155 (ints5)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112221155 (ints5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS5_C
INTS5_N
Motif
Other DBs
NCBI-GeneID:
112221155
NCBI-ProteinID:
XP_024239062
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All DBs
Position
LG21:complement(27902904..27906640)
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AA seq
1013 aa
AA seq
DB search
MSGFFDGTLLTVSMQTSLAHSPQNALSPQELSQEIKSFISGVDQTQGRKLSVREHARCAV
RLLRSVPACRGAVLEHLRGVYNEHVSTFLHNLEADGEGDGDSNLEDVIMEVHGVLAEFIR
LNPRAWAPLVSTWAVDLLGQLSSKHAGRRAAPQSSSLNELLQLWMSCAATRSLMEAYTQC
LAAMIAWCPDQCVDALLDTSVQHSPHFDWVVAHIGSSFPGTIISRVLACGLKDFCSHGTA
DKGQGDKSNRVPKIGSVVGILGHLAARHSDSIRQELLRMFQESLSPPTIPPSSGSTSWEH
STQLCRGAVPFLLQLAALSPSLLGAVSAELVESLRPPVLLQLQAVLQGLPRDELDNMMGL
VVHLIAQSPAGGARILRFLADTATPASVIISGPTPSPHEGVREACDRLLQMLLLHLHKLV
YTCSEGDDSYYSRPHSPSSQAPRVVPFLEEMQSHVGELCAETLRLERKRHLWLHQLLCLL
SVYRGPSVATEALCQLLTLARNPDQLALAWQLHTPLSTCLPGLIPAAVTRCVAQIHTHTL
GPKQLCQLLLNLASAMQSVQEEERRGPGGMGGGASPQSSMALQVGAAVSGHLHDFCPLLL
HGDQAVSHAAVRLLSRSLLPRATLPSHLLLVCRAAVTHFFLALRRRVQAGKGRDGGQGGE
AVNCSVLLLSRLAGYSPLTLKCVLLQLVEGALHKGNADLFGGQSEDIRGDTPISPSLAPD
RGGFLLDINCRFGTTVNFSGSVWSVFHAGVIGKGLKQRSATPHPDAASVIQNVQTLLAVT
VQCCSAPSGNGGNSGGTRHQSTVVPDEPPPINAEAAKMMAVTLVEYICPDVANGELSWPP
EEHARTTVERDIHIRRCFEAHPVLFPLLHVVAAGHPALCYCSAVLRGLLATLLAHWEASR
EPLAVDSPWHLQASCMLVSCMGEGQLLPPVLGNVHEAFPYLTPFEVRLLLLAVWEYVRGN
GPMPQKFVFSAEKGLFCRDFARDGDVARYVAPIHSVLHKNIDRLGHLCWRFQL
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcttttttgacggaactctcctgacagtctccatgcagacctctctcgctcac
tcaccgcagaatgcacttagcccccaggagctgtcccaggagatcaaatccttcatcagt
ggcgtggaccagacccagggtcgtaaactcagcgtccgtgagcatgcccgctgtgcagtg
cgtctgctacgatccgtgcctgcctgtcgtggggcggtgcttgagcacctaaggggcgtg
tacaacgagcacgtctcaacctttcttcacaatctggaggcggacggcgagggcgatggg
gactccaacctggaggacgtcatcatggaggtccatggcgtcctggcagagttcatcagg
ctcaacccccgagcctgggctcccctcgtctccacctgggctgtagacctgctggggcag
ctgagctccaagcatgctggtcgcagggcagctccccaatcctccagcctcaacgagctg
ctgcagctgtggatgtcctgtgcagctacccgctccctcatggaggcctatacccagtgc
ctggcggccatgatagcctggtgtcctgatcaatgtgtggacgctctcctggacacctcc
gtgcagcactccccccactttgactgggtggtggcccacatcggatcctccttcccgggc
accatcatcagccgcgtcctggcctgtggccttaaagacttctgctcccacggaacggct
gacaagggtcagggagacaagagcaaccgagtgcctaagatcggctctgtggtggggatc
ctgggccacctggcggcgcggcactctgacagcatccggcaggagctgctgaggatgttc
caggagagcctcagtcccccgactataccccccagctctggttccacctcctgggagcac
tcaactcagctatgccgaggcgcagtgcccttcctcctccagctggcggcgctgtcaccc
tctctgctgggcgccgtgtctgctgagctggtggagtctctacggcctccagtcttgctc
cagctccaggctgttctacaagggcttcccagggacgagctggacaacatgatggggctg
gttgttcacctcatcgcccagagccctgctggaggggcacgcatcctccgtttcctcgct
gacacggccacccctgcatccgtcattatctccggcccaacgccttcccctcacgagggg
gtccgggaggcctgtgaccgcctcctccagatgctcctgctgcatctccacaagctggtc
tacacctgctcagagggggacgacagctactacagccgcccccactctccctcctcccag
gccccccgggtagtccccttcctggaggagatgcagtcacacgtgggagagctgtgtgcc
gagacattgaggctggaaaggaagcgccatctctggctgcaccagctgctgtgtctgctg
tctgtgtacaggggccccagtgtggccacggaggccctctgtcagctgctcaccctggca
cggaacccagaccagctggccctggcctggcagctccacaccccgctgtccacctgcctg
ccaggcctcatccctgcagcagtgacccgctgcgtggcccagatccacacacacaccctg
ggacccaagcagctctgccagctcctcctcaacctggcctctgccatgcagagtgtacag
gaggaggagaggaggggtcctggaggcatgggaggaggtgctagtcctcagtcctccatg
gcattgcaggttggagcagcggtctcgggacacctccatgatttctgccctctgctcctc
cacggtgaccaggcggtatcccacgctgccgtgcggctcctgtcccgcagcctcctcccc
cgtgccaccctgccttcgcacctgctgctcgtctgtcgggccgccgtcacacacttcttc
ctggcgctgcggaggagagtacaggcagggaaggggagagacggagggcagggaggagag
gcggtgaactgttcggtgctcctcctgtcccgtctggcaggttactcccctctaaccctc
aaatgtgtcctgctgcagctggtggagggagctctacataaaggaaacgctgacctgttc
ggagggcagagcgaggacattagaggggacaccccaatctccccgtccttggcccctgac
cgggggggcttcctgctggacatcaactgcaggtttggcactacggtcaacttctctggc
agtgtgtggtctgtgttccatgctggggtgatagggaagggtctgaagcagcgcagcgct
acgcctcacccagacgctgccagtgtcatacagaacgtccagactctgctggctgtcacc
gtccagtgctgcagcgcgccatctgggaatggtggcaacagtggaggcacccgacaccaa
tccaccgtcgttcccgacgagccgccgcccatcaacgctgaggcggccaaaatgatggcg
gtgacgctggtggagtatatctgccccgacgtggccaacggggaactgtcatggccgcca
gaggaacatgcacgcacaactgtagaacgtgacatacacatccgccgctgcttcgaggcc
caccctgtcctcttccctttactccatgttgtggctgccgggcatcctgctctctgttac
tgttctgcggtgctccggggcctgctggccactctgctagcccactgggaggcttcgagg
gagcctttggcagtagactccccctggcacctccaggcctcttgcatgctggtgtcatgt
atgggcgagggccagctgctgcccccggtgctgggcaacgtccacgaggccttcccctac
ctgacgcccttcgaggtgaggcttctcctcctggctgtgtgggagtatgtgaggggcaat
ggccccatgccacagaagtttgtcttcagtgccgagaagggcctgttctgccgggatttt
gcacgggacggggacgtggcgagatacgtagcgcccatccacagtgtcctgcataagaac
attgaccggctggggcatctatgctggcgtttccagctctga
DBGET
integrated database retrieval system
