Oncorhynchus tshawytscha (Chinook salmon): 112221161
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Entry
112221161 CDS
T05605
Name
(RefSeq) EH domain-containing protein 1
KO
K12483
EH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112221161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221161
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112221161
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112221161
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112221161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
Dynamin_N
EF-hand_4
EHD_N
MMR_HSR1
EF-hand_1
GTP_EFTU
EF-hand_7
Roc
AAA_16
FeoB_N
AAA_22
EF-hand_6
AIG1
PIN_5
AAA_28
EF-hand_5
TsaE
SAS-6_N
Motif
Other DBs
NCBI-GeneID:
112221161
NCBI-ProteinID:
XP_024239069
LinkDB
All DBs
Position
LG21:complement(27840686..27853881)
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AA seq
534 aa
AA seq
DB search
MFRTRDKKTPEPFQDVSQGLKKLYRTKLFPLEDSYQFHDFHSPALEDADFDNKPMVLLVG
QYSTGKTTFIRHLMEQDFPGMRIGPEPTTDSFIAVMHGDQDGMIPGNALVVDPKKPFRKL
NAFGNAFLNRFTCAQMSNPVLESISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRI
ILLFDAHKLDISDEFSEVIRALKNHEDKMRVVLNKADQINTQQLMRVYGALMWSLGKIIN
TPEVVRVYIGSFWAQPLLIPDNRKLFEAEEQDLFQDIQGLPRNAAIRKLNDLIKRARLAK
VHAYIISSLKKEMPSVFGKENKKKELIANLGETYLKIEREHQISPGDFPKLKKMQELLAG
HDFSKFSTMKPKLLEAVEDMLANDIARLMTLVRQEEAAMPSQAVHGGAFEGTMSGPFGHG
YGEGAGEGIDELEWVVGRDKPSYDEIFYTLSPINGKVSGAAAKKEMVKSKLPNTVLGKIW
KLADVDKDGYLDDEEFALANHLIKVKLEGHELPGKLPEHLVPPSKRHQEIDMGE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcactagggataaaaaaacgccagaaccgttccaggatgtttcgcaaggtttg
aagaaactttaccggactaaactctttcccctggaggacagctaccaattccacgacttc
cattcaccggcgctcgaggatgcggacttcgacaacaaacccatggttcttttggtcggt
cagtactcgaccgggaaaactacctttattcggcacctgatggagcaagacttccccggt
atgaggatcgggcccgagccgacgacagactctttcatagctgtgatgcacggtgaccag
gacgggatgatacctggcaacgccttggttgtcgaccccaaaaaacccttccgcaaactc
aacgcatttggtaacgcgttcctcaacagatttacgtgtgctcagatgtccaacccggtc
ctggagagcatcagtatcatcgatacccctggaatcctgtcgggagagaaacagaggata
agcagagggtatgactttgcagcagtactggagtggtttgcggagcgtgtggaccgcatc
atcctcctgtttgacgcccacaagctggacatctcagacgagttctctgaggtgatacgc
gccctgaagaaccacgaggacaagatgcgcgtggtgctgaacaaggctgaccagatcaac
acgcagcagctgatgagggtctacggtgccctcatgtggtcgctggggaagatcatcaac
acccccgaggtggtgagggtgtacatcgggtcgttctgggcccagcctctcctgatccct
gacaacaggaagctgtttgaggctgaggaacaggacttgttccaggacatccaggggctt
ccccggaatgcagcaatacggaaactcaatgacctcatcaagagggcacggctggctaag
gtccatgcctacatcatcagctctttgaagaaggagatgcccagtgtgtttgggaaggag
aacaagaagaaggagctgatcgccaacctgggagagacgtatctgaagatagagagggaa
catcagatctcccctggagacttccctaaactcaagaagatgcaggagctcctggctggc
cacgacttctctaagttctctaccatgaagcccaagctgctagaggctgtggaggacatg
ttggccaacgacatcgcccgcctcatgacactggtccgccaggaggaagccgccatgccc
agccaggctgtccacggaggcgccttcgagggcaccatgtctggccccttcggccacggc
tacggagagggagccggggaaggcatcgacgagctggagtgggtggtgggcagggacaaa
ccctcatacgatgagattttctacacgctgtcgccgatcaatggtaaagtgtcaggcgcg
gcagccaagaaggagatggtgaagtccaagctgcccaacacggtcctcggcaagatctgg
aagctggccgacgtggataaggatggttacctggacgacgaggagtttgcgttggccaat
cacctgatcaaggtgaagctggaggggcatgagctgccggggaagcttccggaacaccta
gtgccaccttctaaacgccaccaggagattgatatgggagagtga
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