Oncorhynchus tshawytscha (Chinook salmon): 112221166
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Entry
112221166 CDS
T05605
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
KO
K08490
syntaxin 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112221166 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221166 (stx5a)
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112221166 (stx5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
HrpB7
DUF16
MCPsignal
Motif
Other DBs
NCBI-GeneID:
112221166
NCBI-ProteinID:
XP_024239078
UniProt:
A0A8C8IDA8
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All DBs
Position
LG21:complement(27753487..27763919)
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AA seq
300 aa
AA seq
DB search
MTCRDRTNEFQSACKSLQSRQNGVQHTKPALSALKQRSDFTLMAKRIGKDLSNTFAKLEK
LTILAKRRSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLIRSRGAPSGRHIQTHSNT
IVISLQSKLASMSNDFKSVLEVRTENLKQQKNRREQFSQRHVSSPLHANNFKSSVLMQDE
SRSMGAEVAINMDNQSNPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVK
EQEETVQRIDANVEDTQLNVDMAHTEILKYFQSVSSNRWLMVKIFLVLIVFFIVFVVFLA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgcagggatcgaaccaacgagttccagtccgcctgcaaatccctacagagcaga
cagaatggtgttcagcacaccaagccagccctcagtgctctcaagcaacgcagtgacttc
accctcatggccaagagaatagggaaggacttgagtaatacatttgctaaactagagaaa
ctcactatattggctaaaagaagatctctatttgatgacaaggcagtggagattgaagag
ttaacctacatcatcaagcaggacattaacagcctgaacaagcagattgcccagctgcag
gatctgatccgttcacgtggagctcccagcggcagacacatccagacccattccaacacc
atcgtcatctccctgcagtccaaactggcgtctatgtccaatgacttcaagtcggttcta
gaagtaagaacggagaacctgaagcagcagaagaacaggagagaacagttctctcagcgt
cacgtctcttctcctctccacgccaacaacttcaagagttcagtgttgatgcaggatgag
tcaaggagtatgggggctgaggtcgccatcaacatggacaaccagtctaaccctctacag
ctccagctcattgatgagcaggactcgtacatccagagccgtgcagacaccatgcagaac
attgagagcaccatcgtagagctgggctctatctttcagcagctggctcacatggtgaag
gagcaggaggagacagtacagaggattgatgctaacgtggaggacactcagctcaacgtg
gacatggctcacacggagatcctcaagtacttccagtctgtgtcctccaaccgctggctc
atggtcaagatcttcctcgtcctcatcgtgttcttcatcgtctttgtggtcttcctcgcc
tga
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integrated database retrieval system
