Oncorhynchus tshawytscha (Chinook salmon): 112221202
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Entry
112221202 CDS
T05605
Name
(RefSeq) homeobox protein MSH-D isoform X1
KO
K09341
homeobox protein MSX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221202
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112221202
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homez
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
112221202
NCBI-ProteinID:
XP_042159271
UniProt:
A0AAZ3RB08
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Position
LG21:32345666..32348928
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AA seq
267 aa
AA seq
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MDSPVDSKDGFSTYEDTPPRRQFKERKTPLSPLPFSVEAIMLDRTHSEGGRRGSGTIISP
LGNYSISVSRQPSSPEYFIHNFYPSSSPVKSETSEPGDCASWISPRCRLSPALNQVNPSL
RKHKTNRKPRTPFTTSQLLSLERKFHHKQYLSIAERAEFSSSLSLSETQVKIWFQNRRAK
AKRLQEADVEKLLKISAAGVGSKPGFYPPGFSSLPFPLCVSLEGLGGGVSGVCGGQGYPF
RRTTLLTTVPHLGVYTSPVGYGLLHLS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggattctccagtagattcgaaagatggcttttcaacctatgaggacactcctccacgg
aggcagtttaaggagcgcaaaacacctttatcacctttacctttcagtgtggaagcgatc
atgttggataggactcatagcgaaggagggagacgcggcagcggtacgataatctctccc
ctggggaattactctatatcggtgtccagacagccgtctagtccagaatactttattcac
aatttttacccgtcttcttcgccagttaaatcagagacgtcggaaccaggggactgtgcg
tcatggatatcaccgcggtgcaggttgtctccagcgctcaaccaggtcaatccctccttg
aggaaacacaagaccaacaggaagccccggaccccattcaccacctcccagctcctgtcc
ctggagaggaagttccatcataaacagtacctgtccatcgctgagcgggctgagttctcc
tcctccctgtccctctcagagacccaggtcaagatctggttccagaaccgacgggctaaa
gccaagagactgcaggaggcagatgtggaaaaactactcaagatttccgctgcaggtgtt
ggatccaagccggggttctatcccccggggttctcctcgctgccgttccccctttgtgtc
agtctggagggtctgggtgggggggtctcaggggtgtgcggaggacaggggtaccccttc
agacgtaccactctgttaacaacagtaccacatctgggggtgtacacctcacctgtaggg
tacggactcctccacctgtcttga
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