Oncorhynchus tshawytscha (Chinook salmon): 112221339
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Entry
112221339 CDS
T05605
Name
(RefSeq) transcriptional enhancer factor TEF-5 isoform X1
KO
K09448
transcriptional enhancer factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221339
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
112221339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
NNH1
Motif
Other DBs
NCBI-GeneID:
112221339
NCBI-ProteinID:
XP_024239265
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Position
LG02:complement(13698177..13779764)
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AA seq
426 aa
AA seq
DB search
MDGDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHIQVLARKKVREYQAGIKAMNLDQASKDKALQNMAALSSAQIVSPSLIKSQLPP
LPHSPYPPQARFWPGPIPGQPGPSQELILELNQGRTPGFGRTSYAIKPFAPSPYTTLPGP
PPPPISNYEPLAPPLPPAATAVPVWQDRTIASSKLRMLEYSAFMEVQRDPDNYSKHLFVH
IGQTNPSYSDPLLEAVDIRQIYDKFPEKKGGLKELYEKGPQNAFFLVKFWADLNSSGMQD
GPGSFYGVSSQYSSSENMTITVSTKVCSFGKQVVEKVETEYARMEGGKSVYRIHRSPMCE
YMINFIHKLKHLPEKYMMNSVLENFTILQVVTDRDTQETLLCIAFVFEVSTSEHGAQYHV
YRLVKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgccgagggggtgtggagcccagacatagagcagagcttccaggaggcc
ctggccatctaccctccctgtggacggaggaagatcatcctctcagatgaaggcaagatg
tatggtcgtaatgagttgatagccaggtacatcaagctgaggacaggcaaaacccgtacc
agaaaacaggtatctagtcacatacaggtgttagcacggaagaaagttcgagaataccaa
gcaggtatcaaggccatgaatttggaccaggcatctaaagacaaggccctccagaacatg
gcagcgttgtcgtctgctcagattgtgtctccgagcctgatcaagagccagctaccccca
ctgccccactctccctaccccccgcaagccaggttttggccaggccctatcccaggacaa
cccggcccctctcaggagctgattctagagctcaaccagggaaggactcctgggtttggc
cgcaccagctatgctatcaaaccttttgcaccgtctccatacacaactctaccaggccct
ccccctccccctatatcaaactatgagcctttggcaccccccctccccccggctgctact
gcggtgcccgtgtggcaggaccggaccatcgcctcctccaagctgcggatgctagagtac
tctgccttcatggaggtgcagagggaccctgacaactacagcaaacacctgtttgtccac
attggccagaccaacccgtcctacagcgaccctctgctggaggcagtggacatcaggcag
atctacgacaagttcccagagaagaagggcggactcaaagagctttatgagaaaggccca
cagaacgcctttttcctagtcaaattttgggcggatctcaacagcagtggcatgcaggac
ggcccaggctccttctacggagtcagcagccaatacagcagctctgagaacatgaccatc
accgtctccaccaaagtctgctccttcggcaaacaggtggtcgagaaagtagagacggag
tacgcccggatggagggagggaagagtgtctacaggatccaccgctctcccatgtgcgag
tacatgatcaacttcatccacaagctcaaacacctgccagaaaaatacatgatgaacagt
gttctggaaaacttcactatacttcaggtggtgacagaccgtgacactcaggagaccttg
ctgtgtatagcgtttgtgttcgaggtctcaacgagtgaacacggggcacagtaccacgtc
tacaggctcgtaaaagactga
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