Oncorhynchus tshawytscha (Chinook salmon): 112221347
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Entry
112221347 CDS
T05605
Name
(RefSeq) partitioning defective 6 homolog beta-like
KO
K06093
partitioning defective protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112221347
09144 Cellular community - eukaryotes
04530 Tight junction
112221347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112221347
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
112221347
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
112221347
NCBI-ProteinID:
XP_042160108
LinkDB
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Position
LG22:37605548..37632946
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AA seq
385 aa
AA seq
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MNKNHRVPSNRTLGAVEVKSKFGAEFRRFSLDRSKPGRFDEFYRLLQHMHRIPNVDLLVG
YADVHGDLLPINNDDNYRKAISVADPVLRLFLQRKEEADYSAFGLDSLTRPKKTVLAAML
LRPDANRKKPLVIISLPRDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSV
RVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVQGKSLDQVTDMMIANS
HNLIVTVKPANQRNNIVRSGGAASGSSGHSSDSGTSFYGYSSPGIALATTPADIIQNFHP
EELESDEDDEDLVIEVDGDAMPIPRTSSASCTIPFIPRYMPHLDLRTTNGALASHNRSGS
LGALSTADRGLEGRSLEEEGTVITL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaccaccgagtgccgagcaaccggactctgggcgccgtggaggtgaagagc
aagtttggggctgaattccgccggttctccctggaccggtccaagccgggccggtttgat
gagttctataggctcctacagcacatgcaccggatcccaaacgtggacctgctggtgggc
tatgctgacgtccacggtgacctgctgccaatcaacaacgatgacaactaccgcaaagct
atctccgtggctgaccccgtgctacgcctcttcctgcagaggaaagaggaagccgactac
tctgcgtttggtctggactctctgacccgtcccaaaaagacggtcctagcagccatgttg
ctacggcctgatgccaaccggaagaagccccttgtgatcatcagcctgcccagggacttc
aggcctgtctcctccatcatcgatgtggatatcctccctgagacacaccgccgggttcgc
ctctacaagcacggccaggagaaaccgctgggcttttacatccgagacggctccagtgtc
cgggtcacgccccagggcctggagaaggttcctgggatcttcatctcccgcatggtgcct
gggggcctggctgagagcactggcctgctggccgtcaacgacgaggttctggaggtcaac
ggcatcgaggtgcaaggcaagtccctggaccaggtgacagacatgatgatcgccaacagc
cacaatctcatcgtgactgtgaagccggccaaccagcgcaacaacatcgtacggagtggc
ggggcagcgtccgggagctcggggcactcgtccgacagtggcaccagtttctacggctac
tcctccccgggcattgccttggcgacgactccggcagacatcatccagaacttccatcca
gaggagctggagagtgatgaggatgatgaggacctggtgatagaggtggacggagatgcc
atgcccatcccacggacctcctcggccagctgtaccatacccttcattcctcgctacatg
ccccacctggacctccgcaccaccaacggagccctggcctcccacaaccgctccggctca
ctgggcgcgctcagcactgccgacaggggcctggagggaaggagcttagaggaggaaggc
accgtcattacactgtaa
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