Oncorhynchus tshawytscha (Chinook salmon): 112221348
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Entry
112221348 CDS
T05605
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 2-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112221348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221348
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112221348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
112221348
NCBI-ProteinID:
XP_042160109
LinkDB
All DBs
Position
LG22:37638676..37686419
Genome browser
AA seq
1837 aa
AA seq
DB search
MQQQRLAQQQQHQKQAESTKTKSMFLSRALGKILSDKEVKRSQHSQLRKACQVALDEIKI
ELEKQKDGSVVPPRANYIEADQYVLPFELACQSKSPRVVSTSLDCLQKLIAYGHITGNAS
DSSAPGKRLIDRLLETICNCFQGPQTDEGVQLQIVKALLTAVTSPHIEIHEGTVLLTVRT
CYNIYLASRNLINQTTAKATLTQMVNVIFTHMETQAVIEAQEKDRLCLPKQNPSPSPGQM
SGGSPRSDSTPDLNGTPSPAASTPDLNTINGQPEECKTEEDVTATEEHREKTPPPVFNDP
LPETPPAVTQSVEEGDEGGGGSELGERGTSGVGQVDSKPTEQPTTDVVEDVAAEPEPQTQ
TAQAGDHPPHIPPEHPDLIPPTPRRVRNQMNGIMGDHGSVSSTDILDLESMQGVQNAVGF
SHILQKDAFLVFRSLCKLSMKPLADGSPDPKSHELRSKVVSLQLLLSVLQGAGPVFRSHE
MFVNAIKQYLCVALSKNGVSSVPEVFELSLAIFLTLLSHFKVHLKMQIEVFFREIFLTIL
ETSSSSFEHKWMVIQTLTRICANAQCVVDIYVNYDCDLNAANIFERLVNDLSKIAMGRSG
QELGMTPLQELSLRKKGLECLVSILKCMVEWSRDMYVNPNLQANLGQEQPSDGEGAERKL
PDQTKSRRGSVSSLDSTMSSSVQSSQPDHPEQYEVIKQQKDVIEHGIELFNKKPKRGVQY
LQDQGMLGTTAEEIAQFLHQEERLDTTQVGEYLGENIRFNKEVMYNYVDQLDFCGRDFVS
ALRAFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQGEFASADTAYVLAFSIIMLTTDLH
SPQVKNKMTKEQYIRMNRGINDSKDLPEEYLSSIYHEIAGKKIAMKDSKEHTITPKTSKH
SVANEKQRRLLYDVEMEQMAKTAKALMEAVSHAQAPFFSATHLEHVRPMFKLAWTPLLAA
FSVGLQDCDDQEVASLCLEGIRCAVRIACIFSMQLERDAYVQALARFTLLTASSSITEMK
QKNIDTIKTLITVAHTDGNYLGNSWHEILRCISQLELAQLIGTGVKTRYISGVARDSQAG
IKGFPIGGEEFMPLGLGTLVGGPDRRQMAHIQESVGETSSQSVVVAVDRIFTGSTKLDGN
AVVDFVRWLCAVSMDELASAHQPRMFSLQKIVEISYYNMNRIRLQWSRIWQVIGDHFNKV
GCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIVKKNRSPTIRDMVIR
CVAQMVNSQAANIRSGWKNIFSVFHQAASDHDETIVELAFQTTGHIVMITFQQHFAAAID
SFQDAVKCLSEFVCNAAFPDTSMEAIRLIRHCAKYVADRPQALREYTSDDMNVAPGDRVW
VRGWFPILFELSCIINRCKLDIRTRGLTVMFEIMKSYGHTFEKHWWHDLFRIVFRIFHNM
KLPEQQTEKHEWMTTTCNHALYAICDVFTQFYEPLSEVLLADIFTQLQWCVRQDNEQLAR
SGTNCLENLVILNGEKFSPEVWNATCSCMLDIFQTTRPDALLTWRPAGQEEEAGDGKHMD
VDFDTQSQNSCDRALSEKGGQSQISTASDDTWKGKPHARMSDQKLFAGLLIKCVVQLELI
QTIDNIVFYPATSKKEDADNMAAAQRDALEEAAEEGVPGQGEQGMYRHLSSQHLFKLLDC
LLESHTFARDFNSNNEQRTALWRAGFKGKSKPNLLKQETSSLACSLRILFRMYCDWQLQD
SWPDIQTRLLLVCSEALSYFISLTSESHREAWTSLLLVLLSGTLRLTDDKFKLHASCYYP
HLCEMMQFDLIPELRAVLRHFFLRIGSVFHIAAPEMG
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcaacgtcttgctcaacaacaacaacaccagaagcaggcagaaagcacaaaa
accaagagcatgtttctgtctagggcgctgggaaaaatcctgtcggataaggaggtgaag
cggagccagcacagccagctgcgtaaagcttgtcaagtagcacttgatgaaatcaaaatc
gagcttgagaagcaaaaagatggctctgtggtcccgccccgagcaaactacattgaagct
gaccaatacgtactgccttttgagctcgcctgtcaatcaaagtccccacgcgttgtcagc
acctcgttggactgcttacagaagctcattgcgtatggccacatcacgggcaatgcctct
gacagtagtgctccagggaagaggctcatcgaccggttactggagaccatttgtaactgt
ttccagggcccacagactgatgagggggtacaactgcagatcgtcaaggctctgctgacg
gcagtcacctcccctcacattgagatccacgagggaacggttctgctgacagtgcgtacc
tgttacaacatctacctggccagccgtaacctcatcaaccagaccaccgccaaggctacg
ctcacacagatggtcaatgtcatcttcacccacatggagactcaggcggttatagaggct
caggagaaggatagactatgtctgcccaagcagaacccctccccttcccctgggcagatg
tctggtggttccccccggtcagactccaccccagacctcaacgggaccccttctcctgca
gccagcacaccggaccttaataccatcaatggccaaccggaggagtgcaagactgaggag
gatgtgactgctacagaggagcacagagagaagacaccacctccagtttttaatgatcca
cttccagaaacaccaccagcagtaacacagtcagtagaggaaggggatgaagggggaggg
ggatcagaattaggggagagggggacatcgggagtaggtcaggtcgattcaaagccaaca
gagcaaccaacgactgatgtggtggaggacgtggccgcagaaccagaaccacaaacccaa
actgcacaagcaggggaccatcccccacacataccaccagagcaccctgatctgattccc
ccaacacccaggagagttaggaaccagatgaacggcattatgggtgaccatggttccgtg
tcctctacagacatcttggatttagagtccatgcagggtgtccagaacgctgttggtttc
tcacacatcctgcagaaagacgccttcctggtcttccgctctctctgcaaactgtccatg
aagccgctggcggacggatcccctgacccaaagtctcatgagctgcgctccaaggtggtg
tccctgcagctgctgctgtctgtgctccagggggcggggcctgtcttccgctcccacgag
atgtttgtcaacgccatcaagcagtacctgtgtgtggccctctcgaagaatggtgtctcc
tctgtgccagaggtgttcgagctctccctcgccatcttcctcaccctgctctcccacttc
aaagtccacctcaagatgcagattgaggtgttcttcagggagattttcctgaccatcctg
gaaacgtcatccagctcctttgaacacaagtggatggtcattcaaaccctgacacggata
tgtgcaaatgctcagtgtgtggtggatatctatgtgaactacgactgtgacctgaacgct
gccaacatctttgagcgtctggtgaatgacctgtctaagattgccatgggaaggagtggc
caggagctggggatgacccctctacaggagctgagtctgcgtaagaagggcctggagtgt
ctggtgtccattctgaaatgcatggtggagtggagcagagacatgtatgtcaaccccaac
ctgcaggccaacctcggccaggagcagccgtcggatggtgagggtgcggagcgcaagctt
cctgaccagacgaagtctcgtagaggcagcgtcagctctctggactccaccatgtcatct
agtgtccagtcctcccagcctgaccacccagaacagtatgaggtcatcaaacaacaaaag
gacgtcattgagcacggcattgagctgttcaacaaaaagcccaagcgaggtgtccagtac
ttacaagaccaaggcatgctgggaaccacagcggaggaaatcgcccagttcctgcatcaa
gaggagcgcttggatacgacacaggtaggggagtacctgggggagaatatccgtttcaac
aaggaggtgatgtacaactatgtggaccagctggacttctgtggccgggactttgtctct
gctctgagggctttcctggagggcttccggctcccaggagaggcccagaagattgacagg
ctcatggagaagtttgctgcccgatacctggagtgtaaccagggacagggggagtttgcc
agtgcagacacagcctacgtcttggccttctccatcatcatgctgaccacagacctgcac
agtccacaggtgaagaacaaaatgaccaaggaacagtacatcagaatgaaccgtggcatc
aacgacagtaaggatctgcctgaggagtacctgtcctccatataccatgagattgctggc
aagaagatcgccatgaaggacagcaaggagcacactatcacacccaagactagcaagcac
agcgtagccaatgagaagcagcgtcgtctgctgtatgatgttgagatggaacagatggcg
aagacagccaaggccctgatggaggctgtaagccacgcccaagcccccttcttcagcgcc
acccatctggagcacgtccggcccatgttcaagctggcgtggacccctctcctggcagct
ttcagcgtgggcctacaggactgtgacgaccaggaggtggcctctctgtgtctggagggg
atccgctgtgctgtcaggattgcatgcatcttcagtatgcagttggagagggatgcgtac
gtccaagccttggctcggttcaccctgctcacagccagctccagcatcactgagatgaag
cagaagaacatcgacaccatcaagacccttatcactgtggcccacacagacggaaactac
ctgggcaactcttggcacgagatcctgcggtgtattagccagctggagttggcccagctg
attggcacgggggtgaagacacgctacatctctggagtggctcgggatagccaggctggc
atcaagggcttccccatcgggggagaggagttcatgcccctgggactggggaccctggtt
ggaggtccagaccggaggcagatggctcatatccaggagtcagtgggagaaaccagttct
cagagtgtagtggtggctgtggacaggatcttcactggttccacaaagctagatggaaat
gcagtggtggactttgtgcgctggttgtgtgcggtctccatggatgagctggcctctgct
caccagccgaggatgttcagtctgcagaagatagtagagatatcttactacaacatgaac
cgtatccgtctgcagtggtcacgcatctggcaggtcattggagaccacttcaacaaggtg
ggctgcaaccccaacgaggatgtggccatctttgcggtggactctctgaggcaactgtca
atgaagttcctggagaaaggagagctggctaacttccgcttccagaaggacttcctccgg
ccatttgaacacatcgtgaagaagaacaggtctcccactatcagggacatggtgatccgc
tgtgtggcccagatggtcaactcccaggcagccaacatccgctccggctggaagaacatc
ttctctgtgttccaccaggccgcctcggatcacgacgagaccattgtggagctggccttc
cagaccactggccacatagtcatgatcacgtttcagcagcactttgcagcagccatagac
tccttccaggatgcggtgaagtgtctgtctgagtttgtgtgcaacgctgccttccctgac
accagtatggaggccatccggctcatccgccactgcgctaaatatgtcgcagaccgaccg
caggctctgcgggagtacacgagtgatgacatgaacgtggccccaggggaccgggtgtgg
gtgagaggctggttccctatcctctttgagctgtcctgcatcatcaaccgctgcaagctg
gacataagaaccaggggtctgactgtgatgtttgagattatgaagagctacggacacacc
tttgaaaagcactggtggcacgacctttttcgcatcgtcttccgcatcttccacaatatg
aagctccctgagcagcagaccgagaagcacgagtggatgaccacgacctgtaaccacgcc
ctgtacgccatctgtgacgtcttcacccagttctatgagcctctcagtgaggtcctgctg
gctgacatcttcactcagctgcagtggtgcgtcagacaagataatgagcagttggcccgg
tcagggactaattgcctggagaacctggtcatcctgaatggggagaagtttagcccagag
gtgtggaacgccacgtgctcctgtatgctggacatcttccagaccaccagaccagacgcc
ctattgacatggcgaccggctggtcaggaagaggaggctggtgatgggaaacacatggat
gtagattttgacactcagtctcagaacagctgtgacagggccctgtcggagaaaggaggg
cagagccagatatccaccgccagcgatgacacctggaaagggaaaccccacgccaggatg
tcagaccagaagctgtttgcaggcctgctcatcaagtgtgtagtgcagttggagctgatc
cagaccattgacaacattgtcttctacccggcaaccagcaagaaggaagacgcagacaat
atggctgctgcacagagggatgccctggaggaggctgcagaggagggggtccctgggcaa
ggggagcagggcatgtacagacacctatcctcccagcacctcttcaagctgctggactgc
ctgctggagtcgcacaccttcgccagagatttcaactctaacaacgagcagaggactgca
ctctggagagcaggatttaaggggaagtcgaagcccaatctgctgaagcaggagacgagt
agtctggcctgtagcctgcgtattctgttccgcatgtactgtgactggcagctccaggac
tcctggcctgacatccaaacgcggttgctgctggtgtgcagcgaggctctgtcctacttc
atcagcttgacctcagagagtcacagagaggcctggaccagcctgctgctagtactgctc
agcgggaccctgcgactgaccgacgataagttcaagcttcatgcctcctgttactaccct
cacctgtgtgagatgatgcagtttgacctgatcccagagctccgtgccgtcctgcgccac
ttcttcctacgcatcggctcagtcttccacatcgctgctcctgagatgggctag
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