Oncorhynchus tshawytscha (Chinook salmon): 112221383
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Entry
112221383 CDS
T05605
Name
(RefSeq) transcription factor HES-4-B-like
KO
K06054
hairy and enhancer of split 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03460
Fanconi anemia pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
112221383
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112221383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221383
03400 DNA repair and recombination proteins [BR:
otw03400
]
112221383
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
112221383
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
112221383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
112221383
NCBI-ProteinID:
XP_024239303
UniProt:
A0A8C8FK45
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Position
LG22:complement(5460478..5462368)
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AA seq
289 aa
AA seq
DB search
MPADTMEKQTASPIAGAPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTALSADTTVLSKYRAGFNECMNEV
TRFLSTSEGVNTEVRSRLLNHLSGCLGQLIAMNYPQPNPNQQTHLAQPLHVQLPSTLPNS
ASMGSKLSPTEAMSPKVFGGFQLVPATDGQFAFLIPNPSFASASTPVIPLYANAGVPVTV
NASPVHGSSAPVVGSPVHGMTSFIGVPQAVSPVGVCTGSESTEPVWRPW
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgacaccatggagaagcaaacggcatcccctattgctggtgcccctgcaaat
ggatcccatactccagacaaacctaagaatgccagcgagcatagaaagtcctcaaagccc
atcatggagaaacgtcggagagcgaggataaacgaaagccttggccaactcaagacactt
attctcgatgcacttaaaaaagatagttccagacattcaaaattggagaaagccgatatt
ctggagatgacagtgaagcatttacgaaatttacagcgtgtgcagatgactgcgctgtca
gcagacactaccgtcctcagtaaataccgggcgggattcaacgaatgcatgaacgaggtc
actcgcttcttatcaaccagcgaaggggtgaacacggaggtgcggtcgcggcttctcaac
cacctgtctggctgcctagggcagttgatcgccatgaactacccccagccaaacccaaat
caacagactcacctcgcgcagccccttcacgtacagctaccctctaccttgcccaacagt
gcctctatgggctccaaactcagccccaccgaggcaatgtcacctaaagtcttcggcggg
ttccagcttgtgcccgccaccgatggacagtttgctttcctaattcccaacccttctttc
gcctcagcatcaaccccagtcatccctctgtatgctaacgcaggtgtgcctgtgacagtc
aacgccagccccgtccatggcagctctgcgccagtagtgggatcccctgtccatgggatg
acatcattcatcggtgtgcctcaggcggtcagccctgtcggtgtctgcactggttcggag
agcactgagcctgtttggcgaccctggtag
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