Oncorhynchus tshawytscha (Chinook salmon): 112221408
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Entry
112221408 CDS
T05605
Name
(RefSeq) iroquois-class homeodomain protein IRX-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221408
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112221408
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PCB_OB
Motif
Other DBs
NCBI-GeneID:
112221408
NCBI-ProteinID:
XP_024239325
UniProt:
A0A8C8EIB7
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Position
LG22:complement(11534116..11535620)
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AA seq
333 aa
AA seq
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MPASQIGFGNFYFERNINMLPGYQIPGLGCQPRVRQQQAPHLAAMTGVPLTYSGLQGYNF
IPYPHYGHIAHMNNSFDLKTVSPYYEALLGRGGPFYPQYRPGATDDPSRVAKVATRESTS
ALKAWLNEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKENRVSWAFKGKSD
EDEGESDEEKSDVTLQKSALVDEDEIDLQTVDDTVEDIGHRVDNSTPELVDARLEKQSSD
DHRDSTRAHGENYVEKSYTKRTSSPSRLGCKDNAECQKPKIWSLAETATSETVKKPHQDN
PCHPRSTEMGKFWSEWASRNGLYIPRYTAHDIL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtcacaaattggatttggcaacttctactttgaaagaaacatcaacatgctc
cctggatatcagataccgggtttgggatgtcaacccagggtacgacagcaacaagcccct
catcttgctgcgatgactggggtccctttgacatattcaggactacagggatacaacttt
atcccctatccacactacggacacattgcgcacatgaacaactcctttgacctgaagact
gtctcaccgtattatgaagcgcttctcggccgaggagggccgttctacccgcaataccga
ccaggcgcaactgatgacccaagcagagtcgccaaggtggctacccgggaaagcaccagc
gcgctcaaggcctggttgaacgagcatctcaagaacccatatcctacaaagggcgagaag
atcatgcttgccatcgtaaccaaaatgagcctcacgcaggtgtcaacttggtttgccaac
gccaggcgacggctgaagaaggagaatagggtgagctgggcgttcaaggggaaatctgac
gaggatgagggcgaaagcgacgaggagaagagtgatgtcactctgcagaaaagcgctttg
gttgatgaagacgaaatagatcttcaaaccgtcgatgacacggtggaggatattggacat
agagtggacaactcaacgccagagttggtggatgcacgcctggagaaacaatcaagcgat
gaccatagagacagcacgcgtgctcacggggaaaattatgtcgaaaagagttacaccaaa
cgcacatcatccccatctcgtctaggatgtaaggacaacgctgagtgtcaaaagcccaaa
atatggtctttggcagaaaccgcgacctcggaaacggtgaaaaagccccaccaggacaat
ccttgtcatcccaggagcacagaaatgggcaaattctggtcagaatgggcatcaaggaat
ggactgtatattcccagatatactgctcacgatattctttaa
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