Oncorhynchus tshawytscha (Chinook salmon): 112221413
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Entry
112221413 CDS
T05605
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112221413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221413
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112221413
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
112221413
Nuclear receptors [BR:
otw03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
112221413
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
112221413
NCBI-ProteinID:
XP_024239329
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Position
LG22:14034689..14040149
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AA seq
565 aa
AA seq
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MNVPPHGAQPYENSLYNSESLNLDLTSRFAMDVSSHTDQLSAPSLTSINSLVGTYAGEFN
AHQIAIAPTTASDPEPPFKIDDFQVYGCYPGTLALSYFDEALSSGGSDFFGSPVSAQSPC
TPGFQTQPASVWDSPFGPYSPNPGSWVADKTASTQPSSFFTFCPGSVEDLSPLGQPQLAE
QDPFSLGHQHPSPLSFSPLTQEPGTLDVSGLIEGRMSAKPHSPTENEGLCAVCGDNASCQ
HYGVRTCEGCKGFFKRTVQKKSKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVV
RTDSLKGRRGRLPSKPKAVQGLSSAVSRVDIIASLVREYIESNSGVEKLDYSKYQETVAS
LSEKEDTCDIKQFYNLLTESMEVIRKWAESIPGFTAFCSEDQELLLDSAFLELFILRLAY
RSNPETDKLIFCNGMVLHRMQCIRGFGDWIDSIMDFSQSLHRMNLDVSSFSCLTTLVIIT
DRHGLKDPKRVEEFQSQLITCLRDHVSSCAPDSTGPNYLSRLLGKLPELRTLCTQGLQRI
FYLKLEDLVPPPPIVDRMTMDILPL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccccccacatggagctcagccttatgagaacagcctctacaactcagagtct
ctgaacctggaccttacctccaggtttgctatggatgtgagtagtcatacggaccagctc
tctgccccttctctgactagcatcaactccctggtgggcacttacgctggagagtttaat
gcccatcagattgccatagctcctaccaccgcctcggaccctgagccgcccttcaaaatt
gatgacttccaggtttacggctgctaccctggcaccttggccctgagctacttcgacgaa
gccctgtcttctggtggctctgactttttcggcagccctgtgtcagcccagtctccctgt
actccaggtttccagacccagcctgcgtcagtttgggactcgcccttcggtccatactct
cccaacccgggcagctgggtggctgataagactgcatcaacacagccatcctctttcttc
accttctgtcccggctcagttgaggatctgtctcctctgggccagccccagctggctgag
caagaccccttctctctgggccatcagcacccctcccccctgtccttctcccctctaacc
caggagccaggcaccctagatgtctcaggcctcattgaagggagaatgtctgcgaaaccg
cacagccctactgaaaacgagggtctctgtgctgtttgtggggacaacgcctcctgccag
cactatggggttcgcacctgtgagggctgcaaaggttttttcaagcgtactgtacagaaa
aaatctaaatacgtgtgccttgccaacaaggactgtccagttgacaagcggcgacggaac
cgctgtcaattctgtcgtttccagaagtgcttggcagtaggcatggtgaaagaagttgtg
agaacagatagcttaaaaggtcgaagaggtcgtctgccttccaagccaaaagcagtccag
ggcctatcgtctgctgtgtctcgagtcgacatcattgcctctcttgtgagagaatacatt
gaatcaaactctggtgttgagaaactggactactccaagtaccaggagactgtggccagt
ctgtcagagaaagaggacacttgtgacatcaaacagttctacaacctcctcacggagtcc
atggaagtgatcaggaagtgggctgagagcatccctgggttcaccgccttctgctccgag
gaccaggagctgctattggattcagccttcttagaactgttcatcttgcgactagcatac
aggtccaaccctgagacggacaagctgattttctgcaatggcatggtgcttcaccggatg
cagtgtatacgaggcttcggtgactggatagactccatcatggacttctcccagagcctc
caccgcatgaacctggacgtgtcatccttctcctgcctcacaactctggtcataatcact
gaccgccacggcctgaaggatccaaagcgggtggaggagttccagagccagctaatcacc
tgtctcagagatcacgtctccagctgcgcccccgactccactgggcccaactacctgtcc
cgccttctgggaaaactgcctgagctacggactctctgcacccagggcctgcaacgcatc
ttctatctcaagcttgaggacttggtcccaccaccccccatagttgacagaatgaccatg
gacattctgcctttatga
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