Oncorhynchus tshawytscha (Chinook salmon): 112221694
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Entry
112221694 CDS
T05605
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse
KO
K24924
receptor-associated protein of the synapse
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112221694 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
112221694 (rapsn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_2
TPR_1
TPR_8
TPR_7
TPR_MalT
zf-RING_11
zf-RING_5
TPR_16
zf-RING_2
SNAP
TPR_19
DUF3856
TPR_10
RPN7
zf-RING_Vps41
Prok-RING_4
zf-RING_UBOX
ARM_TT21_4th
zf-C3HC4
zf-rbx1
zf-RING_4
zf-C3H2C3
zf_RING_Vps8
AKNA
zf-C3HC4_2
PHDvar_NSD
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
112221694
NCBI-ProteinID:
XP_042157924
LinkDB
All DBs
Position
LG19:complement(58228973..58252622)
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AA seq
443 aa
AA seq
DB search
MGKDLLSWSSTESQTTPKRMNIFMRHLLVAEMGQDQTKQQVEKGLKLYQANQTDKALHVW
TKVLEKTSDPGGKFRVLGCLITAHSEMGKYKEMLKYALAQIDTAREMEDPDYLTEGYLNL
ARSNEKLCDFQKTVSYCKTCLNMQGTTVSLQLNGQVCLSMGNAFLGVSVFQKALESYEKA
LRYAHNNDDKMLESRVCCSLGNFYIQLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQ
YHMSVAYRKLDRLPDAMECCEESMKIALQHGDRPLQALCLLNFADIHRCRNDVDKALPRY
ESSMCIMTEIGNRLGQTQVYLGVGKCWLQQKELDKALDALQRAQELSEALGTKLCSLKVH
CLSEGIYRSKERQEELREQVVKFLQCVEELELYCGMCGESIGEKNQQLQALPCSHIFHLQ
CLQNNGSRGCPKCRRSSMKPGFV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggatctactttcttggtcctccactgaaagccaaacaacacctaaacggatg
aatatttttatgaggcacctccttgtagcagagatgggccaggaccaaaccaagcagcag
gtagagaaaggcttaaagctgtaccaggccaatcagactgacaaagccctgcatgtctgg
accaaggtgctggagaagacctcagaccccggggggaagttcagagtgctgggctgtctc
atcaccgctcactctgagatggggaagtataaagagatgctcaagtatgccttggcccag
atagacacagccagggagatggaggacccagactacctgactgagggctacctgaacctg
gctaggagcaacgagaagctgtgtgacttccagaagactgtgtcctactgtaagacctgc
ctcaacatgcagggaactactgtcagtctgcaacttaacggacaggtgtgtctgagcatg
ggcaacgcgttcctgggcgtcagtgtgttccagaaggctctagagagctatgagaaggcc
ctgcgctacgcccacaacaacgatgacaagatgctggagtctagagtctgctgcagcctg
gggaacttctacatccagctcaaggactatgagaaggccctgttcttcccgtgtaaagcg
gctgagctggtgaatgactacggtaaaggctggagtctgaagtacagggccatgagccag
taccacatgtctgtagcctacaggaaactggaccgcctgcctgatgccatggagtgctgt
gaggagtccatgaagatagccctgcagcacggggaccgacctctccaggcgctgtgctta
ctgaacttcgctgatatccatcgctgccggaatgacgttgataaagcattgcctcgttat
gagtcctccatgtgtataatgacagagattgggaaccgtcttggccagacccaggtgtac
ctgggggtagggaagtgttggctccagcagaaagaattggacaaggctctggatgctctg
cagcgagctcaggagttgtcagaagctttaggaaccaagctgtgtagtctaaaggtgcac
tgtctcagtgaggggatctaccgcagtaaggagaggcaggaggagctgagggagcaggtt
gtgaagttcctgcagtgtgtggaggagctggagctgtactgtggaatgtgtggcgagtcc
ataggagagaagaaccaacagctgcaggctctgccctgctctcacatcttccacctccag
tgtctacagaacaacggttccaggggctgccccaaatgtcgtcggtcctccatgaagcct
gggtttgtgtga
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