Oncorhynchus tshawytscha (Chinook salmon): 112221726
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Entry
112221726 CDS
T05605
Symbol
hoxc9a
Name
(RefSeq) homeobox protein Hox-C9a
KO
K09294
homeobox protein HoxB/C/D9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221726 (hoxc9a)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112221726 (hoxc9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
112221726
NCBI-ProteinID:
XP_042159629
UniProt:
A0A8C8IY21
LinkDB
All DBs
Position
LG22:9802931..9806577
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AA seq
272 aa
AA seq
DB search
MHVKENGTIDMSTTGPISNYYVDSLIHHESEDVLAARFSAPGSHSTGPRPTSLIPECGDY
PSCSFSPKPPVFTTSWAPVHSQSSVVYHPYSHQPHLGTDSRYVRSWLEPISGTMSFPGYP
ANGRHYGLKPDAFQEHRAGDCLASNGRNYTDYLYCTSADIREKNQTNIPSPETELLASGK
HKDEKPELDPNNPVANWIHARSTRKKRCPYSKYQTLELEKEFLFNMYLTRDRRYEVARVL
NLTERQVKIWFQNRRMKMKKMNKEKTDANKEQ
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaaaagagaacggaaccatcgacatgtcgaccacgggtcccataagtaattat
tatgtggattccttgatacaccatgaaagcgaggatgttcttgcggctcgattctcggct
cctggttcgcactccaccggccctcgtccaacgtcccttataccggagtgtggtgactat
ccgtcctgcagcttttccccgaaacctcccgtgtttactacctcttgggcccctgttcac
tcccagtcctcagtggtttaccacccatacagccaccaacctcatttaggaacggactca
aggtatgtgcggtcatggctagagccgatctcggggaccatgtccttccctggctaccca
gccaacggcagacactatgggctgaagcccgacgccttccaggagcatcgagccggtgac
tgcctcgcctccaacggacgcaactacacggattatctctactgcacctccgctgacatt
cgagaaaagaaccaaacgaacatcccttctcccgagaccgagcttttggcttccggaaag
cataaagacgagaagccagaattagacccaaataacccagtggcaaattggattcacgcg
cgttctacaaggaagaagaggtgcccttattcaaaataccagactctcgaacttgaaaag
gagtttttgttcaatatgtaccttaccagagaccgtcgatacgaggtggcaagagtcctc
aacctcactgagaggcaggtcaaaatatggttccagaaccggcggatgaagatgaagaaa
atgaacaaggaaaaaaccgacgccaacaaagaacaataa
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