Oncorhynchus tshawytscha (Chinook salmon): 112221754
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Entry
112221754 CDS
T05605
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04210
Apoptosis
otw04530
Tight junction
otw04540
Gap junction
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112221754
09143 Cell growth and death
04210 Apoptosis
112221754
09144 Cellular community - eukaryotes
04530 Tight junction
112221754
04540 Gap junction
112221754
09142 Cell motility
04814 Motor proteins
112221754
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112221754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112221754
03036 Chromosome and associated proteins [BR:
otw03036
]
112221754
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112221754
04147 Exosome [BR:
otw04147
]
112221754
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112221754
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
112221754
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
112221754
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112221754
Exosomal proteins of other body fluids (saliva and urine)
112221754
Exosomal proteins of colorectal cancer cells
112221754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
112221754
NCBI-ProteinID:
XP_042159646
LinkDB
All DBs
Position
LG22:complement(10405619..10408768)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtccatgtgggtcaggctggagtccagattggcaatgcctgc
tgggagctctactgcctggaacatgggatccagcctgacggacagatgcccagtgacaag
accatcggaggaggagacgactccttcaacaccttctttagtgagactggggctggaaag
catgtccccagggctgtgtttgtagacctggagcccacagtcatagatgaggtgcgcact
gggacctaccgccagttattccatcctgaacagctcatcactggcaaagaggatgctgcc
aacaactacgcccgtggacactacactattggcaaagagatcattgacctggtgttggac
aggatccgcaaactggctgaccagtgtacaggccttcagggcttcctggttttccacagc
tttggaggtggcaccggctctggtttcacctctctgctgatggagcgcctgtctgttgac
tacggcaagaagtccaagctggagttctccatctatccagctccccaggtgtccacagct
gtggtggaaccttacaactccatcctgaccacccacaccaccctagagcactctgactgt
gctttcatggtggataatgaggctatatatgacatctgtcgtaggaacctcgacattgat
cgtcccacctacaccaacctcaacaggctcattagccagattgtttcctccattactgct
tcccttcgattcgatggtgcccttaatgttgatctgacagagttccagaccaacttggtg
ccctatccacgtattcattttcctctggccacctatgccccagtcatctctgcagagaag
gcttaccatgagcagctctctgtctctgagatcaccaatgcctgctttgagccggccaat
cagatggtgaaatgtgaccctcgccacggcaagtatatggcttgttgccttctgttccgt
ggtgatgtggtgcccaaagatgtcaatgctgctattgccaccatcaagaccaaacgttct
attcagtttgttgactggtgtccaactggtttcaaggttggcatcaactatcagcctccc
actgtggtccctggtggagacctggccaaagtccagagggctgtgtgcatgctgagcaac
accactgctgtggcagaggcctgggctcgtcttgaccacaagtttgacctgatgtacgcc
aaacgtgcctttgtgcactggtatgtgggtgagggcatggaggagggagagttctctgaa
gccagagaggacatggcagccctggagaaggattacgaggaggtaggggttgactccatt
gagggggagggagaggaggagggagaggagtattga
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