Oncorhynchus tshawytscha (Chinook salmon): 112221805
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Entry
112221805 CDS
T05605
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112221805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112221805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112221805
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112221805
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112221805
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112221805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PH_11
BAR
Trypan_PARP
PH_21
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
112221805
NCBI-ProteinID:
XP_024239921
LinkDB
All DBs
Position
LG22:complement(11904534..11979089)
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AA seq
848 aa
AA seq
DB search
MTVDFEECVKDSPRFRANINEVETEVVEIEVKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHTFVKEDVRKFKE
TKKHFDRVREDLEIAQVKNAQAPRSKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
ATVQQRTLMQDFSYDDSKVELFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLV
YQKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPTKSCMLQAESDKLRLAWIQAVQ
ASIASAYRESPDYHYVERLDRTASPSVSSIDSASEPRERSMRGESILHRIQCLPGNEYCC
DCGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVI
NHIYEGACEEQGLKKPGPSSSRQEKEAWIKSKYVEKKFLKKLGATEVLVNGGRKSARRWS
VKKCRRHNSATTVPKTRRKYRQELGSASPATLSSAASALERKFRRESLFCPDELDNLFSY
FDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEEREVSEDSSGEAEMEPEP
ETQSDPEDRRELHPGALLYKASQARNLPVMAEALAHGAEVNSVHDEDDGKSPLIQAVIGG
SLIACEFLLQNAADVNQRDAKGRGPLHHATYLGHTGQVCLFLKRGATQNDGDEDGQDPLS
IAVQAANADIVTLLRLARMNEEMRESEGPFGQPGDTTYLDIFREFSHMASHNPEKLKRRS
VHFRHSFR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggattttgaagaatgtgtgaaagattcaccccggttcagggcgaacattaat
gaagtggagacggaggtggtggagattgaagtgaaactagacaagttggtgaagctatgc
agtgggatgatcgaggcagggaaggcgtatgtcagcgccaacaaactctttgtgaacggg
atccgggacctgtcccaacaatgcaagaaggatgagatgatatcggagtgtctggagaag
tgtggggagagcctccaggaaatagtcaactaccacatgattctgttcgatcaagcccag
agatctgtgaagcagcagttacacacctttgtgaaagaggatgtccgtaaattcaaggag
accaagaagcactttgaccgtgtgcgtgaggacttggagatagcccaggtgaagaacgcc
caggcccccaggagcaaacctcacgaggtggaggaggccaccggtacactcagcatcacc
aggaagtgcttccgacacctggccctcgactacgtgcttcagattaacgtccttcaagcc
aagaagaagtttgagatcctagatgctatgctgtccttcatgcatgcccagtactccctc
tttcagcagggctacaacctgctggatgagattgacccctacatgaagaagctggctgct
gagttggatcagttggtgattgactcggccatggagaagagggatatggaacacaagcac
gccaccgtacagcagaggactctcatgcaggacttctcgtatgacgactcaaaggtggag
ttgttcaacgtggacgctcccaatggcgtggtgatggaggggtacctgttcaagagggcc
agcaatgctttcaagacctggaaccgacggtggttttccatccagaacagtcagctggtc
tatcagaagaagctgaaggattccctgacggtggtggtggaggacctcaggctttgctct
gtcaagccctgtgaggacatcgagaggaggttctgcttcgaggttgtctcccccaccaag
agctgtatgctccaagcggagtcggacaagcttcggctagcctggatccaagcagtgcag
gccagcattgcctcggcatacagggagagcccagactaccattatgtcgagcgcctggac
aggaccgcctcgccgtctgttagcagtatcgactcggccagtgagcctcgggagcgtagc
atgaggggggagagtattctgcaccgcatccagtgtctcccgggcaacgagtattgctgt
gactgtggccaggctgacccgcgctgggcctccatcaacctgggcatcctgctttgcatc
gagtgctccggcatccacaggagtttgggggttcactgctccaaggtgcgctctctaacg
ttggactcatgggaacctgagttactcaagttaatgtgcgagctgggaaacagtgtcatc
aaccacatctatgagggagcatgtgaggagcagggcctgaagaaaccagggccctcaagt
tccaggcaagagaaggaggcgtggatcaaatctaagtacgtggagaagaagttcctgaag
aagttgggggccactgaggtgctggtgaacggcgggcgaaagtcagcacgccggtggagt
gtgaagaagtgccggagacacaacagtgccaccacagtgcccaagactcgacgaaaatat
cggcaggagcttggtagcgcctcccctgccaccctctcctcggcggcttcagctctagag
aggaagttccggcgagagtcactgttttgtccagatgagctggacaacctcttctcttac
ttcgacacgggatctgggcctcgtagccctgcaggtctgagcagtgacagtggcctgggg
ggcagtacagacggcagcacagacatcctagtgttcggctcagtggtggacagtgtcaca
gaggaggagcgtgaggtgtcagaggactctagcggagaggctgagatggagccggagcct
gagacccagtcggacccagaggataggcgtgagctccaccctggggcgctgctctacaag
gcctcccaggcacgcaacctgccagtcatggccgaggcgctggcccacggggctgaggtc
aactccgtccatgacgaggatgatggcaagagcccactcatacaggctgtgattgggggc
tctttgatagcctgtgagttcctgctccagaatgcagctgacgtcaaccaaagagacgca
aaggggagggggccactgcaccacgccacatatctgggacacacagggcaggtgtgtttg
ttcctgaagagaggagccacgcagaacgacggggacgaggatggccaggaccctctgagt
atcgctgtgcaggcagccaacgcagacatcgtcaccttgttgcgtctggccaggatgaac
gaggagatgcgggagtcggagggaccgttcggccagccaggagacactacttacctggat
atcttccgagagttttctcacatggcctcacacaacccagagaaactgaagcggaggagt
gtgcatttcagacactctttcaggtag
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