Oncorhynchus tshawytscha (Chinook salmon): 112221834
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Entry
112221834 CDS
T05605
Name
(RefSeq) POU domain, class 6, transcription factor 1 isoform X1
KO
K09368
POU domain transcription factor, class 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112221834
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112221834
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112221834
NCBI-ProteinID:
XP_024239970
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Position
LG22:complement(13817033..13827190)
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AA seq
655 aa
AA seq
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MDLQDLPAADTPLTVNEQPLGSCPLKFLTKNNQVIVMSGHETIRVLEVEVDQASLPSLMP
DGRTDLGGEDVSNQAKQPEAGTQDSPPAPHNTGGVGEPFVGYRYVLGDQVVAVDSAASAV
QTLAQTAVPISVSLSQPQATMPITVQSLQGCQQVLTQDGLATLMTGMMAQTGSLGQPLLI
PLSMAGSMGGQGLAVLTFPTSNVATLPGLSAASQSGGLLKLPFAGLQGLQGLQTATVLNP
VQTQQAVFQSQTASLQQVQAAMQQAQQNTQVAAAQLTQAMPSVSQPSVSVSTLQSAGLSI
NPAINNMFWMPPFLSSQISAASLGAQPQFISSLTSTPIITSAMSGITSQIITNAQGQVIG
TIPLMLNPASLTGGAATQALNLQGFQGLQVQTVQPQLVLNNQGQIIATIGNGPATVPTSA
AIIPKHNVPVTFSKPSTQAQVTTVTQSPVIIAPQPFAMKTVTPISSSVHITCGDTPTVGQ
LVSKPQQGCTDEEGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATEGPAYSQSAICR
FEKLDITPKSAQKLKPVLERWLAEAELWNQKGQQNLMEFVGGEPSKKRKRRTSFTPQAIE
VLNTYFEKNALPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKINVFQVQP
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaggatctccctgctgctgacacacccctcactgtcaatgaacagccatta
ggttcctgcccattgaaattccttaccaaaaacaaccaggtgatcgtgatgtctggtcat
gagacgatccgtgtcctggaagtggaggtagatcaagcctctcttccatccttaatgcct
gatgggaggactgatttggggggtgaggatgtgagtaatcaggctaagcagcctgaggca
ggaacacaggacagcccgccagcaccccacaacactgggggagtaggtgagccctttgta
ggataccgatacgtgctgggggaccaggtggtggctgtcgattctgcagcctctgcggtc
cagactcttgctcagactgcagttcccatcagtgtctccctgtcgcagccacaggccacc
atgcccatcactgtgcagagcttgcagggctgtcaacaggtcctgacccaggatggtctg
gccactctgatgacagggatgatggcccagacaggctccctgggccagcccctgctcatc
cccctcagcatggcagggtccatggggggccagggcctggctgtcctcaccttccccacc
agcaacgtagccacactccctggcctttcagctgccagccagtccggaggcctcctcaaa
ctaccctttgccggcttgcaaggcttacaaggcttgcaaacagccacggtgctaaaccct
gtccagacccagcaggcggttttccagtctcagacagcatcactacagcaggtccaggca
gctatgcagcaggctcagcagaacacgcaggtggctgcagcacaactgacccaggccatg
ccgtccgtctctcagcccagtgtgtctgtgtcaacactccagtctgcaggcctctccatc
aaccctgccattaacaatatgttctggatgcctccgttcctctcctctcagatcagtgct
gcgtctctaggggctcagcctcagttcatcagctccctcacttccactcccatcatcacc
agtgccatgtctggaatcaccagccagatcatcaccaacgcacagggacaggtgattgga
accatccccctgatgctgaaccctgcctcactgacaggaggggctgctactcaggctctg
aatctccagggctttcaaggcctgcaggtccagacagtccagccacagctggttctgaac
aaccagggccagatcattgccaccataggaaatggacctgctacagtccccacttctgct
gctattattcccaagcataatgttcctgtgacattctcaaagcccagcacccaggctcag
gtaacaactgttacgcaatcacctgtgatcatcgccccacaaccgtttgcaatgaagaca
gtcactccaatctcctcctcagtccatatcacctgtggagacacacccaccgtgggacag
cttgtcagcaagccacagcaagggtgcacggatgaggagggcattaatctggaagagatt
cgagagtttgccaagaacttcaagatccgccggctgtccctggggctgacgcagacacaa
gtgggacaggccctcacggctacagagggcccggcctacagccagtctgccatctgcagg
tttgagaagctggacattacacccaagagtgctcagaaactgaagcccgtgctggagcgg
tggctggccgaagcagagctatggaaccaaaagggtcagcagaatttgatggaatttgtg
ggtggtgagccgtccaagaaacgcaagcgtcgcaccagcttcaccccgcaggccatcgaa
gtgctcaacacctactttgagaagaatgccctgccaacgggccaggagattacggaaatc
gctaaggagctcaactatgaccgtgaggttgtccgtgtatggttctgcaacaggcggcag
acactgaaaaacaccagcaagatcaatgtgtttcaagttcagccttaa
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